Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0636 ATGGTGATGGGAGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAAAAGATCATCCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAAAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTCCCCGTCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGGACCTTCGCTGGCTTGCCGGAAAATTGTGTCTTTGATTCTTCAGGGATCGTTGCAGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACCGCCACACAAGGCGGTTTTCGACAAATTTTACCGGTAAAGCGGCGGAGGGATTGCCAAGATGGCCAAACTTGTTGA 546 46.89 MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6819124 6819669 - CePI673135_03g006360.1 Cec03g0636 198260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0636 181 PANTHER CYCLIC DOF FACTOR 2 32 117 IPR045174 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0006355(InterPro)
Cec03g0636 181 Pfam Dof domain, zinc finger 61 116 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec03g0636 181 ProSitePatterns Zinc finger Dof-type signature. 65 101 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec03g0636 181 MobiDBLite consensus disorder prediction 35 49 - -
Cec03g0636 181 Coils Coil 23 55 - -
Cec03g0636 181 ProSiteProfiles Zinc finger Dof-type profile. 63 117 IPR003851 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec03g0636 181 MobiDBLite consensus disorder prediction 29 58 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0636 Cec-Chr3:6819124 Cec10g1611 Cec-Chr10:30548978 5.00E-31 dispersed
Cec03g0636 Cec-Chr3:6819124 Cec04g2078 Cec-Chr4:38768650 4.30E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29206 PF02701 zf-Dof 6.40E-32 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0636 - - - 0.0