Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0646 ATGGAGAAAAAGGGTACCATTTTAATGCAAAGGTACGAGCTTGGGAGAATGCTTGGACAAGGCACTTTTGCTAAAGTCTACCATGCTCGTAATCTCAACTCTGGCCAGAGCGTCGCCATTAAAATCATTGACAAAGAGAAAGTGTTACGTGTTGGGTTGATCGACCAAATCAAGAGGGAAATCTCTGTTATGCGCCTTGTCCGACATCCCAATGTGGTACAGCTTTATGAGGTTATGGCTAGCAGGACCAAAATCTATTTTGCTATGGAGTATGTTAAAGGAGGGGAGCTTTTTAACAAAGTGGCTAAAGGGAAGCTTAAAGAAGATGCTGCTCGTAAGTACTTTCAACAGCTAATTGGTGCTGTTGATTATTGTCATAGCCGTGGTGTGTACCATAGAGATATCAAGCCTGAAAATCTCCTTCTTGATGAGTTTGGGAATCTCAAGATTTCTGATTTTGGGTTAAGTGCTTTGGCCGAGTCTAGAAGACAAGATGGGCTTCTTCATACAACTTGTGGTACTCCTGCTTATGTTGCCCCTGAAGTCATCAACAAGAAAGGTTATGATGGTGCTAAAGCTGATATTTGGTCATCTGGGGTTGTTCTGTTTGTTCTTCTGGCTGGTTATCTCCCTTTCCATGATCCAAATCTAATGGAAATGTACAGAAAAATCTCAAGAGGAGAATTCAGATGCCCTCATTGGTTTCCCCCAGAAGTTCGAAAACTACTCTCAAGAATCCTTGACCCATATCCTCACACTAGAATAAACATGGCCAAACTCATGGAAAATTCCTGGTTCAAGAAGGGTTTCAAAACAAATGTAGCAACTCCAAAACAACTTCAAATCAATGGAGATGTGTCGTATGTGAGTGATGTTCATTCCGCTTTCGACGACATTAGTTGGGATGAAGGAAGCTCTGTTAGTAACACCAGTGATAGTGGAAAGCCACCAACAGCTAAAGCCCCAATGAGACATAATTCCTTCAATGCATTTGACATCATATCTCTCTCACCAGGTTTTGATCTCTCAGGTTTGTTTGAGAGTGATGCAAATGAGAGGCCACAGTCTCGTTTCACGACCACGAAACCTGCATCCGCGATCGTGTCGAAGTTTGAGGAAATAGCAGAAATGGAAAGGTTCAAAGTGATGAAGAAAGATGGGATTGTTAAACTGCAGGGGAGTAAACAGGGGAGGAAAGGACAATTGGCTATAGATGCTGAAATATTTGAAGTAACACCTTCATTTTTTGTGGTGGAAGTGAAGAAAACTGCTGGAGACACATTGGAATATAGGCAATTTTACAACAAAGACATCAGACCTTGTCTTAAGGATATTGTATGGACTTGGGAAGGAAATGAGCAGCAGCAACAACAACAACCACAATCACAAATTGTTTAG 1398 41.56 MEKKGTILMQRYELGRMLGQGTFAKVYHARNLNSGQSVAIKIIDKEKVLRVGLIDQIKREISVMRLVRHPNVVQLYEVMASRTKIYFAMEYVKGGELFNKVAKGKLKEDAARKYFQQLIGAVDYCHSRGVYHRDIKPENLLLDEFGNLKISDFGLSALAESRRQDGLLHTTCGTPAYVAPEVINKKGYDGAKADIWSSGVVLFVLLAGYLPFHDPNLMEMYRKISRGEFRCPHWFPPEVRKLLSRILDPYPHTRINMAKLMENSWFKKGFKTNVATPKQLQINGDVSYVSDVHSAFDDISWDEGSSVSNTSDSGKPPTAKAPMRHNSFNAFDIISLSPGFDLSGLFESDANERPQSRFTTTKPASAIVSKFEEIAEMERFKVMKKDGIVKLQGSKQGRKGQLAIDAEIFEVTPSFFVVEVKKTAGDTLEYRQFYNKDIRPCLKDIVWTWEGNEQQQQQQPQSQIV 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7026716 7028230 + CePI673135_03g006460.1 Cec03g0646 198270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0646 465 MobiDBLite consensus disorder prediction 303 323 - -
Cec03g0646 465 FunFam Non-specific serine/threonine protein kinase 2 290 - -
Cec03g0646 465 FunFam Non-specific serine/threonine protein kinase 323 447 - -
Cec03g0646 465 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0646 465 Pfam NAF domain 326 384 IPR004041 GO:0007165(InterPro)
Cec03g0646 465 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524(InterPro)
Cec03g0646 465 SMART serkin_6 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0646 465 SUPERFAMILY Protein kinase-like (PK-like) 8 319 IPR011009 -
Cec03g0646 465 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0646 465 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 3 440 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cec03g0646 465 Gene3D Transferase(Phosphotransferase) domain 1 3 312 - -
Cec03g0646 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0646 465 Gene3D Kinase associated domain 1, KA1 323 448 - -
Cec03g0646 465 CDD CIPK_C 329 443 - -
Cec03g0646 465 CDD STKc_SnRK3 11 265 - -
Cec03g0646 465 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Cec03g0646 465 ProSiteProfiles NAF domain profile. 323 347 IPR018451 GO:0007165(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0646 Cec-Chr3:7026716 Cec04g0775 Cec-Chr4:27305405 1.80E-173 dispersed
Cec02g1870 Cec-Chr2:36512637 Cec03g0646 Cec-Chr3:7026716 2.10E-20 wgd
Cec02g1848 Cec-Chr2:36269350 Cec03g0646 Cec-Chr3:7026716 8.70E-27 wgd
Cec03g0646 Cec-Chr3:7026716 Cec04g2088 Cec-Chr4:38837804 1.30E-147 wgd
Cec03g0646 Cec-Chr3:7026716 Cec07g0308 Cec-Chr7:3006547 1.20E-18 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71834 PF00069 Pkinase 1.00E-71 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0646 K07198 - csv:101206082 837.795