Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0646 | ATGGAGAAAAAGGGTACCATTTTAATGCAAAGGTACGAGCTTGGGAGAATGCTTGGACAAGGCACTTTTGCTAAAGTCTACCATGCTCGTAATCTCAACTCTGGCCAGAGCGTCGCCATTAAAATCATTGACAAAGAGAAAGTGTTACGTGTTGGGTTGATCGACCAAATCAAGAGGGAAATCTCTGTTATGCGCCTTGTCCGACATCCCAATGTGGTACAGCTTTATGAGGTTATGGCTAGCAGGACCAAAATCTATTTTGCTATGGAGTATGTTAAAGGAGGGGAGCTTTTTAACAAAGTGGCTAAAGGGAAGCTTAAAGAAGATGCTGCTCGTAAGTACTTTCAACAGCTAATTGGTGCTGTTGATTATTGTCATAGCCGTGGTGTGTACCATAGAGATATCAAGCCTGAAAATCTCCTTCTTGATGAGTTTGGGAATCTCAAGATTTCTGATTTTGGGTTAAGTGCTTTGGCCGAGTCTAGAAGACAAGATGGGCTTCTTCATACAACTTGTGGTACTCCTGCTTATGTTGCCCCTGAAGTCATCAACAAGAAAGGTTATGATGGTGCTAAAGCTGATATTTGGTCATCTGGGGTTGTTCTGTTTGTTCTTCTGGCTGGTTATCTCCCTTTCCATGATCCAAATCTAATGGAAATGTACAGAAAAATCTCAAGAGGAGAATTCAGATGCCCTCATTGGTTTCCCCCAGAAGTTCGAAAACTACTCTCAAGAATCCTTGACCCATATCCTCACACTAGAATAAACATGGCCAAACTCATGGAAAATTCCTGGTTCAAGAAGGGTTTCAAAACAAATGTAGCAACTCCAAAACAACTTCAAATCAATGGAGATGTGTCGTATGTGAGTGATGTTCATTCCGCTTTCGACGACATTAGTTGGGATGAAGGAAGCTCTGTTAGTAACACCAGTGATAGTGGAAAGCCACCAACAGCTAAAGCCCCAATGAGACATAATTCCTTCAATGCATTTGACATCATATCTCTCTCACCAGGTTTTGATCTCTCAGGTTTGTTTGAGAGTGATGCAAATGAGAGGCCACAGTCTCGTTTCACGACCACGAAACCTGCATCCGCGATCGTGTCGAAGTTTGAGGAAATAGCAGAAATGGAAAGGTTCAAAGTGATGAAGAAAGATGGGATTGTTAAACTGCAGGGGAGTAAACAGGGGAGGAAAGGACAATTGGCTATAGATGCTGAAATATTTGAAGTAACACCTTCATTTTTTGTGGTGGAAGTGAAGAAAACTGCTGGAGACACATTGGAATATAGGCAATTTTACAACAAAGACATCAGACCTTGTCTTAAGGATATTGTATGGACTTGGGAAGGAAATGAGCAGCAGCAACAACAACAACCACAATCACAAATTGTTTAG | 1398 | 41.56 | MEKKGTILMQRYELGRMLGQGTFAKVYHARNLNSGQSVAIKIIDKEKVLRVGLIDQIKREISVMRLVRHPNVVQLYEVMASRTKIYFAMEYVKGGELFNKVAKGKLKEDAARKYFQQLIGAVDYCHSRGVYHRDIKPENLLLDEFGNLKISDFGLSALAESRRQDGLLHTTCGTPAYVAPEVINKKGYDGAKADIWSSGVVLFVLLAGYLPFHDPNLMEMYRKISRGEFRCPHWFPPEVRKLLSRILDPYPHTRINMAKLMENSWFKKGFKTNVATPKQLQINGDVSYVSDVHSAFDDISWDEGSSVSNTSDSGKPPTAKAPMRHNSFNAFDIISLSPGFDLSGLFESDANERPQSRFTTTKPASAIVSKFEEIAEMERFKVMKKDGIVKLQGSKQGRKGQLAIDAEIFEVTPSFFVVEVKKTAGDTLEYRQFYNKDIRPCLKDIVWTWEGNEQQQQQQPQSQIV | 465 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7026716 | 7028230 | + | CePI673135_03g006460.1 | Cec03g0646 | 198270 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0646 | 465 | MobiDBLite | consensus disorder prediction | 303 | 323 | - | - | |
Cec03g0646 | 465 | FunFam | Non-specific serine/threonine protein kinase | 2 | 290 | - | - | |
Cec03g0646 | 465 | FunFam | Non-specific serine/threonine protein kinase | 323 | 447 | - | - | |
Cec03g0646 | 465 | Pfam | Protein kinase domain | 12 | 266 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0646 | 465 | Pfam | NAF domain | 326 | 384 | IPR004041 | GO:0007165(InterPro) | |
Cec03g0646 | 465 | ProSitePatterns | Protein kinases ATP-binding region signature. | 18 | 41 | IPR017441 | GO:0005524(InterPro) | |
Cec03g0646 | 465 | SMART | serkin_6 | 12 | 266 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0646 | 465 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 319 | IPR011009 | - | |
Cec03g0646 | 465 | ProSiteProfiles | Protein kinase domain profile. | 12 | 266 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0646 | 465 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 3 | 440 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cec03g0646 | 465 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 312 | - | - | |
Cec03g0646 | 465 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 130 | 142 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g0646 | 465 | Gene3D | Kinase associated domain 1, KA1 | 323 | 448 | - | - | |
Cec03g0646 | 465 | CDD | CIPK_C | 329 | 443 | - | - | |
Cec03g0646 | 465 | CDD | STKc_SnRK3 | 11 | 265 | - | - | |
Cec03g0646 | 465 | FunFam | Non-specific serine/threonine protein kinase | 3 | 91 | - | - | |
Cec03g0646 | 465 | ProSiteProfiles | NAF domain profile. | 323 | 347 | IPR018451 | GO:0007165(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0646 | Cec-Chr3:7026716 | Cec04g0775 | Cec-Chr4:27305405 | 1.80E-173 | dispersed | |
Cec02g1870 | Cec-Chr2:36512637 | Cec03g0646 | Cec-Chr3:7026716 | 2.10E-20 | wgd | |
Cec02g1848 | Cec-Chr2:36269350 | Cec03g0646 | Cec-Chr3:7026716 | 8.70E-27 | wgd | |
Cec03g0646 | Cec-Chr3:7026716 | Cec04g2088 | Cec-Chr4:38837804 | 1.30E-147 | wgd | |
Cec03g0646 | Cec-Chr3:7026716 | Cec07g0308 | Cec-Chr7:3006547 | 1.20E-18 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71834 | PF00069 | Pkinase | 1.00E-71 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0646 | K07198 | - | csv:101206082 | 837.795 |