Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0660 ATGGATAATCCCAGGAATATCCCTGCCAACAACCCTTCCAGCAACACGGGACAATGTTTCAATCCTGCATTTGTTCATGCAATAGCAGTTCCTGAAGTTAATATGCTGGACAAAACAGGCCAGATATGTGTCGTTGCAGGGGGGGATGGTATTGTTCATGTGATTGATATTGAATCTGAGAAATTGAAGATTTCCTCAAAAACTGGTAAAAGAACACAAACAAGATCTAAGGGAGTTACAGCAGCTTGTGATATGGATAACCAAACGCAAACTGGAAGAAAGAGGTTATATTTGGATTACACTGTTGGTGGACATTCTGCTGCTGTGTCCTGTGTGGCGTTTTCTCAATTTGGAGAGAAAGGGAAGTTCATAGTTTCTGGTGGGAATGATAAATGCATAAAGCTTTGGAATTGGTGTGGAGTTCCTGATGCTGGGGAAACTAGCAGCAGCAACAACGATATTCTTCATTTGAACATCAATCTGAGCAAAAAGGTGAATTGGCTTTGTACTACTCCATCTGAATCAGAAAACCTTATCGTTTGTGATACCAGCAAAGTAGTGAAGATCCTTAAGAATAACAATTTTGAGTCTAAGAGTAGGCATGGTCTGAGAATCACCACCAAATATTACCTTCCTGACAAGGTGCAGCACCCTCCTATTTCCAGGAATCAGCATTTCACCTTCATCCAAGCAAAAATTGATCGAAAGAAGAAGATGCGAACTCCAGTGAGAAGCGCACTTCAATTTGAAGATTCACAGACTCTGGAGTTGCTTGCGTTTGTGTGGGGTTGCTTTTCCAGTTTCTCCTGTAGCGGTTTGGTTGGTGCACAATCGTCTGTTAGTAGTTCAAATCAAAGACGTGCTCGCCCTAACCAAATCTTTGCTTACACTTCCCGCAAAATTCAAATCTGTTTCTACACACACTTTGCTTCTCATCTCTTCTTCCTCTCCTCTGCAGATGGAATCAGGTGTCCGAAGAAAGGGCAAGTGAGAAACAGGATGATGGTTTCTGATGTTCCCATTTGCCACACTTGTGGTGAACCAGTCGGGGTTGATGGCAATGGAGAGGTTTTCGTTGCTTGCCATGAGTGCCATTTTCCTATTTGTAGAGTCTGCGTTCAGTATGATATTAAGGAAGGTCGAAATGTTTGCTTGCGGTGTGGCTCTACATTTGACGAGAACTTGCTGATGGATGCTGATACGAACAGATCAGGAGATCGAAACACAATGGAATCTCATCTCAGTCATTCTCAGGATGTTGGAGTTCATGCTAGACATGTCAGTAGTGTGTCAACAGTGGATAGTGAATTGAATGATGAATCCGGGAACCCAATTTGGAAGAACAGAGTAGAGAGTTGGAAGGATAAGAAGAATAAAAAGAAACGGCCTACTGTGAAGACTGAACAGGAAGCTCAAATACCTCCCCAACAACAAATGGAAGAGAAACAGATTTCAGAGGAGAGTGCAGTTACACACTCATTTTCTTCAGTTTATCCAATTCCGTCCAGCAGATTAACACCATACAGAATTGTGATAATCATGCGATTGATCATTCTAGCCCTTTTCTTTCAGTATCGAATAACAAATCCTGTTGATAGTGCTTTTGGTCTATGGCTCACTTCTATCATATGCGAAATCTGGTTTGCCTTCTCCTGGGTGTTGGATCAGTTCCCTAAATGGTCTCCCGTCTGCAGAGACACATTCATTGACAGATTATCAGCCAGGTTTGAAAGAGAGGGAGAACCTTCCCAACTTGCTGCTGTGGATTTTTTTGTGAGTACTGTTGATCCATTGAAAGAACCTCCACTAATCACTGCCAATACCGTGCTTTCAATCCTTGCTGTGGACTATCCTGTCGATAAAGTTTCCTGCTATGTGTCTGACGATGGTGCAGCTATGCTTACATTTGAATCTCTAGTTGAAACAGCTGACTTTGCAAGAATGTGGGTTCCATTCTGCAAGAAGTTCTCCATTGAACCCCGAGCTCCTGAGTTTTACTTCTCACAGAAAATAGACTACTTGAAAGATAAAGTGCAACCTTCTTTTGTCAAGGAACGTAGGGCAATGAAAAGAGCCTATGAAGAGTTTAAAGTACGAGTCAATGCTTTGGTAGCGAAGGCTCAGAAAACGCCAGATGAAGGCTGGTCCATGCAAGATGGAACAGCTTGGCCAGGAAATAATCCACGTGACCACCCTGGAATGATTCAGGTTTTTCTTGGAAATACTGGCGCCCATGACGTAGAGGGTAATGACCTTCCTCGACTGGTCTATGTCTCCAGAGAGAAGAGGCCTGGTTACCAGCATCACAAAAAAGCTGGTGCTGAAAATGCTCTGGTGAGAGTATCAGCAGTCCTCACAAACGCCCCATTCATTCTCAACCTTGACTGTGATCATTATGTTAACAATAGCCAAGCTATACGTGAGGCAATGTGTTTCTTGATGGACCCACAAGTAGGCCGAGATGTATGCTATGTTCAATTTCCTCAGAGGTTTGATGGCATTGATCGAAGTGATCGATACGCCAATCGCAACACAGTTTTCTTTGATGTGAACATGAAAGGATTGGATGGCATCCAGGGACCAGTTTACGTGGGTACAGGTTGTGTTTTCAATAGACAGGCTCTTTATGGCTATGGACCTCCTACTCTGCCTAGCTTATCTAAGACGACATCCTCATCATCCTGCTCTTGGTGTGGCTGCTGCTCGTGCTGCTGTCCTTCCAAGAAGATCTCAAAAGATCCGACTGAGATTCAGAGAGATGCAAAAAGAGAAGAGCTTGATGCTGCAATCTTTAATCTAAGGGAAATAGATAATTATGATGAGTACGAGAGGTCAATGCTAATTTCTCAATTGAGCTTTGAGAAAACTTTTGGCCTATCTTCTGTATTTATTGAGTCTACACTAATGGAAAATGGAGGAGTTGCAGAATCTGCAAATCCATCGACTTTGATTAAAGAAGCAATTCATGTCATTGGCTGTGGTTATGAAGAGAAGACTGCCTGGGGAAAAGAGATTGGTTGGATATACGGTTCAGTCACTGAGGATATCTTAACGGGTTTCAAGATGCATTGCCGAGGATGGAGGTCCATCTACTGCATGCCCGTGAGGCCAGCATTCAAAGGATCAGCACCGATTAACCTTTCTGATCGTCTGCACCAAGTTCTTCGATGGGCACTTGGATCTGTTGAGATTTTTCTCAGTAGACATTGTCCATTGTGGTATGGATTCGCAGGCGGTCGGCTTAAATGGCTCCAAAGAATGGCATACATAAACACCATTGTCTATCCGTTCACCTCCCTCCCTCTCATTGCCTACTGCTCATTGCCTGCAATCTGCCTGCTGACAGGAAAATTTATCATACCAACGCTCTCAAACCTAGCAAGTACCCTGTTTCTTGGTCTCTTCTTGTCCATCATTCTCACAAGTGTCCTCGAGCTGCGTTGGAGCGGTGTTAGCATCGAAGATATATGGCGTAACGAGCAATTTTGGGTCATAGGAGGCGTCTCAGCCCATCTCTTTGCTGTCTTCCAAGGGTTCCTAAAGATGTTGGCTGGCATCGACACCAACTTCACAGTTACTGCAAAGGCAGCTGATGATGCTGAATTTGGAGAGCTTTACATGGTGAAATGGACAACACTTTTGATCCCTCCTACAACTCTCATTGTCGTTAACATGGTCGGTGTCGTTGCTGGATTTTCTGATGCATTAAATGGTGGATATGAAGCTTGGGGACCTCTTTTTGGCAAGGTCTTCTTTGCCTTCTGGGTGATTTTTCATCTCTATCCATTCCTCAAAGGTCTCATGGGTCGCCAAAACCGGACTCCAACCATTGTTGTTCTATGGTCAGTACTGTTGGCATCAGTTTTCTCACTTGTTTGGGTGAAGATCAACCCATTTGTGAACCAAGTTGACAGTACAACCGTTGCCCAAAGCTGCATTGCCATAGATTGTTGA 3954 43.65 MDNPRNIPANNPSSNTGQCFNPAFVHAIAVPEVNMLDKTGQICVVAGGDGIVHVIDIESEKLKISSKTGKRTQTRSKGVTAACDMDNQTQTGRKRLYLDYTVGGHSAAVSCVAFSQFGEKGKFIVSGGNDKCIKLWNWCGVPDAGETSSSNNDILHLNINLSKKVNWLCTTPSESENLIVCDTSKVVKILKNNNFESKSRHGLRITTKYYLPDKVQHPPISRNQHFTFIQAKIDRKKKMRTPVRSALQFEDSQTLELLAFVWGCFSSFSCSGLVGAQSSVSSSNQRRARPNQIFAYTSRKIQICFYTHFASHLFFLSSADGIRCPKKGQVRNRMMVSDVPICHTCGEPVGVDGNGEVFVACHECHFPICRVCVQYDIKEGRNVCLRCGSTFDENLLMDADTNRSGDRNTMESHLSHSQDVGVHARHVSSVSTVDSELNDESGNPIWKNRVESWKDKKNKKKRPTVKTEQEAQIPPQQQMEEKQISEESAVTHSFSSVYPIPSSRLTPYRIVIIMRLIILALFFQYRITNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWSPVCRDTFIDRLSARFEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARMWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRAYEEFKVRVNALVAKAQKTPDEGWSMQDGTAWPGNNPRDHPGMIQVFLGNTGAHDVEGNDLPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSQAIREAMCFLMDPQVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPTLPSLSKTTSSSSCSWCGCCSCCCPSKKISKDPTEIQRDAKREELDAAIFNLREIDNYDEYERSMLISQLSFEKTFGLSSVFIESTLMENGGVAESANPSTLIKEAIHVIGCGYEEKTAWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKWLQRMAYINTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASTLFLGLFLSIILTSVLELRWSGVSIEDIWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDAEFGELYMVKWTTLLIPPTTLIVVNMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINPFVNQVDSTTVAQSCIAIDC 1317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7113726 7125470 - CePI673135_03g006600.1 Cec03g0660 198284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0660 1317 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 741 880 IPR029044 -
Cec03g0660 1317 FunFam Cellulose synthase 705 879 - -
Cec03g0660 1317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 326 414 IPR013083 -
Cec03g0660 1317 Pfam Cellulose synthase 588 1307 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Cec03g0660 1317 SUPERFAMILY RING/U-box 330 394 - -
Cec03g0660 1317 SUPERFAMILY WD40 repeat-like 38 198 IPR036322 GO:0005515(InterPro)
Cec03g0660 1317 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 886 915 IPR017896 -
Cec03g0660 1317 SUPERFAMILY Nucleotide-diphospho-sugar transferases 602 1115 IPR029044 -
Cec03g0660 1317 Pfam Zinc-binding RING-finger 340 392 IPR027934 -
Cec03g0660 1317 Gene3D - 9 240 IPR015943 GO:0005515(InterPro)
Cec03g0660 1317 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 102 137 - -
Cec03g0660 1317 ProSiteProfiles Trp-Asp (WD) repeats profile. 102 137 IPR001680 GO:0005515(InterPro)
Cec03g0660 1317 SMART WD40_4 16 56 IPR001680 GO:0005515(InterPro)
Cec03g0660 1317 SMART WD40_4 95 137 IPR001680 GO:0005515(InterPro)
Cec03g0660 1317 MobiDBLite consensus disorder prediction 448 480 - -
Cec03g0660 1317 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 508 1284 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Cec03g0660 1317 Pfam WD domain, G-beta repeat 100 137 IPR001680 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0660 Cec-Chr3:7113726 Cec06g0149 Cec-Chr6:1527952 0.00E+00 dispersed
Cec03g0660 Cec-Chr3:7113726 Cec02g0927 Cec-Chr2:12228845 9.60E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0660 K10999 - csv:101208988 1953.72