Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0673 | ATGACTTCGGGTTCCAGAATGCCGACTTGGAAGGAGAGGGAAAACAACAAGCGTCGTGAGAGGCGCCGTCGTGCAATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTACGGCAACTACAAGCTCCCCAAGCATTGCGACAATAATGAGGTCCTCAAAGCCCTCTGTGATGAAGCTGGATGGACTGTCGAAGAAGACGGCACTACCTATCGGAAGGGATGCAAACCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCGAGTCCATGTTCATCTTACCAGCCAAGCCCACGGCCATCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACATCTTCCCGTTATGCCATTAATGGCAATGACAATGCTACCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTTTCCTCAGGCTCATCATCAGCTTCCTCCAGGCTGCCTCACCATCTTTTTATTACTTGTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCAACTGCACGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCGTCGACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATCCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTCGGATTTAAGGAGGCAATGTCTGCCGGAGGATCTCGTAATTGGACTCCTGCACAAAGCAGGACGTGCTCACCCACAGTTGCTGCAGGCACTGATCATACTTCAGATGTTCCTATGATGGATGGAACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCCATTGGGATAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTCACACTTGGAAATTCAAGCACTAGGTGA | 984 | 51.63 | MTSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPRPSYNPSPASSSFPSPTSSRYAINGNDNATDPNSLIPWLKNLSSGSSSASSRLPHHLFITCGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADPAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSRTCSPTVAAGTDHTSDVPMMDGTAAEFAFGSCSIGIVKPWEGERIHEECISDDLELTLGNSSTR | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7252565 | 7255180 | + | CePI673135_03g006730.1 | Cec03g0673 | 198297 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0673 | 327 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cec03g0673 | 327 | MobiDBLite | consensus disorder prediction | 255 | 273 | - | - | |
Cec03g0673 | 327 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 327 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Cec03g0673 | 327 | MobiDBLite | consensus disorder prediction | 251 | 273 | - | - | |
Cec03g0673 | 327 | MobiDBLite | consensus disorder prediction | 108 | 125 | - | - | |
Cec03g0673 | 327 | MobiDBLite | consensus disorder prediction | 165 | 186 | - | - | |
Cec03g0673 | 327 | MobiDBLite | consensus disorder prediction | 84 | 125 | - | - | |
Cec03g0673 | 327 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 141 | IPR008540 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0673 | Cec-Chr3:7252565 | Cec07g1113 | Cec-Chr7:26331372 | 1.00E-122 | dispersed | |
Cec03g0673 | Cec-Chr3:7252565 | Cec04g1622 | Cec-Chr4:35562619 | 6.20E-56 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29210 | PF05687 | BES1_N | 2.70E-66 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0673 | - | - | - | 0.0 |