Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0673 ATGACTTCGGGTTCCAGAATGCCGACTTGGAAGGAGAGGGAAAACAACAAGCGTCGTGAGAGGCGCCGTCGTGCAATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTACGGCAACTACAAGCTCCCCAAGCATTGCGACAATAATGAGGTCCTCAAAGCCCTCTGTGATGAAGCTGGATGGACTGTCGAAGAAGACGGCACTACCTATCGGAAGGGATGCAAACCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCGAGTCCATGTTCATCTTACCAGCCAAGCCCACGGCCATCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACATCTTCCCGTTATGCCATTAATGGCAATGACAATGCTACCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTTTCCTCAGGCTCATCATCAGCTTCCTCCAGGCTGCCTCACCATCTTTTTATTACTTGTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCAACTGCACGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCGTCGACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATCCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTCGGATTTAAGGAGGCAATGTCTGCCGGAGGATCTCGTAATTGGACTCCTGCACAAAGCAGGACGTGCTCACCCACAGTTGCTGCAGGCACTGATCATACTTCAGATGTTCCTATGATGGATGGAACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCCATTGGGATAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTCACACTTGGAAATTCAAGCACTAGGTGA 984 51.63 MTSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPRPSYNPSPASSSFPSPTSSRYAINGNDNATDPNSLIPWLKNLSSGSSSASSRLPHHLFITCGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADPAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSRTCSPTVAAGTDHTSDVPMMDGTAAEFAFGSCSIGIVKPWEGERIHEECISDDLELTLGNSSTR 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7252565 7255180 + CePI673135_03g006730.1 Cec03g0673 198297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0673 327 MobiDBLite consensus disorder prediction 1 21 - -
Cec03g0673 327 MobiDBLite consensus disorder prediction 255 273 - -
Cec03g0673 327 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 327 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cec03g0673 327 MobiDBLite consensus disorder prediction 251 273 - -
Cec03g0673 327 MobiDBLite consensus disorder prediction 108 125 - -
Cec03g0673 327 MobiDBLite consensus disorder prediction 165 186 - -
Cec03g0673 327 MobiDBLite consensus disorder prediction 84 125 - -
Cec03g0673 327 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 141 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0673 Cec-Chr3:7252565 Cec07g1113 Cec-Chr7:26331372 1.00E-122 dispersed
Cec03g0673 Cec-Chr3:7252565 Cec04g1622 Cec-Chr4:35562619 6.20E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29210 PF05687 BES1_N 2.70E-66 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0673 - - - 0.0