Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0681 | ATGGAAACGAATAACAGTAACAACGGGGTGAGGTTTTTGTTGGGGAAGCAATCGTCGATGGCGCCGGACCGGAAATCGGAGGAGGAGGCGGAGGCGGAGGCGGAGGCGGCGGGAGACGGGGAGGAGATCGATCCAGGGGTGAGATTGATGTATTTGGCGAATGAAGGCGATTTAGAAGGGATTAAGGAGCTTCTAGATTCTGGAATTGATGTCAATTTTCACGATGTTGATAATCGGACGGCGCTTCATGTTGCTGCTTGTCAAGGCTGCTCCAAGATCGTCGATTTATTGCTCCACCGTGGCGCTGAGATTGACCCTAAAGATCGCTGGGGTAGTACGCCTCTTGCAGATGCTATATTCTACAAAAATCATGAAGTTATCAAATTGCTGGAAAAAAGAGGCGCAAAACATCTGATGGCTCCCATGCTTGTCAAGCATGCTCGTGAAGTCCCAGAATATGAAATTGATCCTAAAGAATTTGACTTCACAAACAGTGTCAACTTGACCAAGGGTACCTTCCATCTTGCATCATGGCGCGGAATCCAAGTTGCAGTCAAAGAGCTTCCCGAGGATGTGATTTCAGAGGAGGATAAAGTGAACGCCTTTAGAGATGAGCTTGCATTGCTTCAGAAGATTCGGCATCCTAATGTCGTTCAATTTCTTGGTGCTGTCACTCAAAGTAGTCCCATGATGATTGTTACTGAATATTTGCCTAAGGGAGATCTTTGTCAACTGTTACAGAGAAAAGGAGCATTAAAACCAATTGTAGCTGTGAAATTTGCTCTTGATATTGCAAGGGGAATGAACTATTTGCACGAAAATAAACCTGCCCCGATCATCCACCGTGATCTCGAGCCATCAAATATATTGCGAGATGACACTGGGAACCTGAAAGTTGCAGACTTTGGAGTTAGCAAATTGCTCACAGTCAAGGAGGATAAACCTCTAATTTGTCAAGACACTGCTTGCCGATATGTCGCTCCAGAAGTTTTCAAAAACAATGGATACGATACCAAAGTAGATGTCTTCTCCTTTGCTTTAATTCTACAAGAGATGATCGAAGGGCAACCACCGTTTTCAAACAAAAAAGAAAATGCCATTCTTAAAGAGTATGCAGCCGGAGTACGCCCTCCTTTCAAAGCTCCCGCTAAATGCTACGCCCATGGAATTAAAGAGTTGATTGAAGATTGCTGGGATGAGAAGCCATCAAAGAGACCAACTTTTAGGCAGATAATCACGAGGCTGGAAACAATTCATCACAGTCTTAGCCATAGAAGGCGTTGGAAGCTCCCAACAATGAGATGTTTTCAGGATCCAGAAGCTAAGATAAGAAGAGACCATCTCTCAAGCAGCCGGAGCCTTTCATCACGATCTGCAAGCAGCATATGA | 1389 | 44.85 | METNNSNNGVRFLLGKQSSMAPDRKSEEEAEAEAEAAGDGEEIDPGVRLMYLANEGDLEGIKELLDSGIDVNFHDVDNRTALHVAACQGCSKIVDLLLHRGAEIDPKDRWGSTPLADAIFYKNHEVIKLLEKRGAKHLMAPMLVKHAREVPEYEIDPKEFDFTNSVNLTKGTFHLASWRGIQVAVKELPEDVISEEDKVNAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLCQLLQRKGALKPIVAVKFALDIARGMNYLHENKPAPIIHRDLEPSNILRDDTGNLKVADFGVSKLLTVKEDKPLICQDTACRYVAPEVFKNNGYDTKVDVFSFALILQEMIEGQPPFSNKKENAILKEYAAGVRPPFKAPAKCYAHGIKELIEDCWDEKPSKRPTFRQIITRLETIHHSLSHRRRWKLPTMRCFQDPEAKIRRDHLSSSRSLSSRSASSI | 462 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7320698 | 7325664 | + | CePI673135_03g006810.1 | Cec03g0681 | 198305 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0681 | 462 | FunFam | Os01g0748600 protein | 148 | 435 | - | - | |
Cec03g0681 | 462 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cec03g0681 | 462 | ProSiteProfiles | Ankyrin repeat profile. | 77 | 109 | IPR002110 | GO:0005515(InterPro) | |
Cec03g0681 | 462 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 77 | 416 | IPR051681 | GO:0004674(PANTHER) | |
Cec03g0681 | 462 | SUPERFAMILY | Protein kinase-like (PK-like) | 171 | 418 | IPR011009 | - | |
Cec03g0681 | 462 | SUPERFAMILY | Ankyrin repeat | 48 | 137 | IPR036770 | - | |
Cec03g0681 | 462 | ProSiteProfiles | Protein kinase domain profile. | 127 | 422 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g0681 | 462 | Gene3D | Phosphorylase Kinase; domain 1 | 161 | 237 | - | - | |
Cec03g0681 | 462 | Pfam | Protein tyrosine and serine/threonine kinase | 174 | 415 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g0681 | 462 | Gene3D | - | 15 | 150 | IPR036770 | - | |
Cec03g0681 | 462 | CDD | STKc_MAP3K-like | 171 | 415 | - | - | |
Cec03g0681 | 462 | ProSiteProfiles | Ankyrin repeat region circular profile. | 77 | 109 | - | - | |
Cec03g0681 | 462 | PIRSF | ILK | 1 | 437 | - | - | |
Cec03g0681 | 462 | SMART | ANK_2a | 44 | 73 | IPR002110 | GO:0005515(InterPro) | |
Cec03g0681 | 462 | SMART | ANK_2a | 77 | 106 | IPR002110 | GO:0005515(InterPro) | |
Cec03g0681 | 462 | SMART | ANK_2a | 110 | 139 | IPR002110 | GO:0005515(InterPro) | |
Cec03g0681 | 462 | Gene3D | Transferase(Phosphotransferase) domain 1 | 238 | 453 | - | - | |
Cec03g0681 | 462 | FunFam | serine/threonine-protein kinase STY46-like | 155 | 238 | - | - | |
Cec03g0681 | 462 | Pfam | Ankyrin repeats (3 copies) | 49 | 136 | IPR002110 | GO:0005515(InterPro) | |
Cec03g0681 | 462 | FunFam | Integrin-linked protein kinase family | 26 | 153 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0681 | Cec-Chr3:7320698 | Cec09g1458 | Cec-Chr9:22219160 | 7.30E-87 | dispersed | |
Cec05g2630 | Cec-Chr5:37064021 | Cec03g0681 | Cec-Chr3:7320698 | 4.60E-81 | transposed | |
Cec02g1918 | Cec-Chr2:37007107 | Cec03g0681 | Cec-Chr3:7320698 | 1.60E-140 | wgd | |
Cec03g0681 | Cec-Chr3:7320698 | Cec04g2113 | Cec-Chr4:39034756 | 1.00E-144 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71840 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-55 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0681 | - | - | - | 0.0 |