Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0686 | ATGTTTACAGGACTTGTGTATCAATCAATGCTGTCAAACAATCATAACAACAGTCCTCCTACTCCCAGAACCAGGTTGGAAAGGCTTCTTAGGGAAAGAGAGCTCAGGAGATCAAACCGGTCTTCTCTCAATGAAGAAGCACGAGATGCTTACAGTCTGGGAGAAGTCAACAGTTACGATCTCTTCACATTTGCTGGTGATGGTTGTGGGTCATTTAATGAGGAAGAGCTCTTAGAAGGGATATCAGTGGTAAAAGATTTCTTTGATGGATTCCAAAGGCCAGAAGGGAGGACTTCTAAGCAACGTCTTCTAGTTGTAGCAAACAGGTTACCTGTGTCTGCTGTTAGGAAAGGGAAGGAGGCATGGCATCTCGAAATCAGCGTGGGTGGTTTAGTCAGTGCACTTTTAGGACTAAAGGAGTTCGAGGCAAGATGGATTGGTTGGGCTGGTGTGAATGTACCTGATGAAGCAGGACAGAGAGCCTTAGAGAAGGCATTAGCTGAAAAGAAATGCATACCAGTCTTTCTTGATGAGGAGATTGTTCATCAGTATTACAATGGCTACTGTAACAACATCTTGTGGCCTCTATTTCATTATCTTGGTCTCCCACAAGAAGATCGGCTTGCAACAACACGAAGTTTTCAGTCACAGTTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTTGTAAACAAATATTATGAAGAGGGAGATGTTGTTTGGTGTCATGATTATCACTTGATGTTTCTCCCAAAATGTCTTAAAGAGCACAATAATACGATGAAAGTTGGTTGGTTCCTTCACACCCCATTTCCATCCTCAGAAATACACAGAACTCTACCGTCTCGTTCAGAGCTGTTGAGATCTGTTCTTGCAGCTGATTTAGTTGGTTTCCACACATATGATTATGCTAGGCATTTTGTTAGTGCCTGCACCCGTATTCTTGGATTAGAGGGTACACCTGAAGGAGTAGAGGATCAAGGAAAACTGACTCGCATAGCTGCTTTTCCAATTGGAATAGATTCTGACCGATTCATTCGAGCTCTTAAACTCCCTCAAGTCCAGGATCACATTAAAGAATTACAAGAAAGATTTGCAGGACGAAAGGTAATGCTGGGTGTTGATCGTCTTGATATGATTAAGGGAATACCCCAAAAGATTTTGGCATTTGAAAAATTTCTTGAAGAAAATCCAACGTGGCGTGACAAAGTAGTTTTGCTGCAAATTGCAGTGCCAACAAGGACAGATGTTCCCGAATATCAAAAGCTAACGAGTCAGGTTCATGAGATTGTTGGGCGAATTAATGGGAGATTTGGCACTCTTAGTGCAGTTCCAATACATCATCTGGATCGTTCCCTTGACTTCCATGCATTATGTGCTTTATATGCGGTCACTGATGTAGCACTAGTTACATCTTTGAGAGATGGAATGAATCTTGTGAGCTATGAGTTTGTTGCCTGCCAAGCTTCCAAGAAAGGTGTTCTTATTCTAAGTGAGTTTGCAGGTGCTGCACAGTCATTAGGTGCCGGTGCTATTTTAGTTAATCCATGGAATATCACTGAAGTTGCTGCTTCAATTGGTTATGCTTTGAATATGCCAGCTGACGAAAGAGAAAGGCGACACCATCATAACTTCATGCACGTTACAACTCACACATCCCAAGAATGGGCTGCAACATTTGTGAGCGAACTCAACGACACCATAGTTGAAGCTCAGATCAGAACCAGACAGATACCACCTTTTCTTCCAATTAGAGAAGCAGTGAACTGTTATTCTCGCTCACACAATCGATTGGTTATTCTGGGTTTCAATGCTACCTTAACAGAAGCAGTTGATCCCCTTGGAAGAAGATATGGCCAAATAAGAGACATGGATCTTAAAGTACATCCAGATGTGAGAGAGCCCTTGAAGAAGCTTTGCGATGACCAGAATACTACAGTGGTTGTCCTCAGTGGCAGTGACAGAAGTGTCCTAGATGATAATTTCGGCGATTACAACATGTGGTTGGCAGCAGAAAATGGGATGTTCTTACGTCCGACAAAGGGCGAATGGATGACGACAATGCCCGAAAATTTACATATGGACTGGGTTGAGAGTGTTAAGCATGTTTTCGAGTATTTTACTGAAAGAACTCCTAGATCCCATTTTGAGCTTCGCGAAACTTCATTGGTGTGGAACTACAAATATGCAGATGTTGAGTTTGGAAGACTTCAAGCGAGGGACTTGTTGCAGCACCTATGGACTGGTCCAATCTCAAATGCATCGGTTGATGTTGTCCAAGGCAGTCGATCAGTCGAGGTTCGAGCAGTTGGTGTTACAAAGGGTGCTGCCATTGATCGAATATTGGGAGAAATAGTTCGTGATAAAGGCATAAACAAGCCTATTGACTATGTTCTCTGTGTTGGACACTTCCTAACCAAGGATGAAGATGTCTATACATTTTTCGAACCCGACCTTCCTTCTGAAGTGCCACCTGCAGCAAGAACCACAGTCGCCAATCCATTCGGAGGAGTACCGGTGCCAAAGATCTCAAACAATGGAGCCCCACCAAGCAGGTCGGCACGCCTCAAGAAACAGCGCTCCCTTTCCATTTTAGAAAGAAGAGCAAATAGCCATGGGAGTGCAGTGTTTTGGAGGCCTATAGTGCAGGATCGATTGTCGCTGCACGAGGGTTCATCTGTTCTTGATCTCAAGGGTGACGATTACTTCTCCTGTGCTGTGGGGCGGAAACGATCCAGTGCTAGATATCTTCTTGGATCATCAGATGATGTTGTCACACTTGTGAAGGAATTGTCAGAATGTTCAGAGTCAAGTTTAAGTTAG | 2829 | 43.34 | MFTGLVYQSMLSNNHNNSPPTPRTRLERLLRERELRRSNRSSLNEEARDAYSLGEVNSYDLFTFAGDGCGSFNEEELLEGISVVKDFFDGFQRPEGRTSKQRLLVVANRLPVSAVRKGKEAWHLEISVGGLVSALLGLKEFEARWIGWAGVNVPDEAGQRALEKALAEKKCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFDAYKKANQMFADVVNKYYEEGDVVWCHDYHLMFLPKCLKEHNNTMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRIAAFPIGIDSDRFIRALKLPQVQDHIKELQERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPTWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLSAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALNMPADERERRHHHNFMHVTTHTSQEWAATFVSELNDTIVEAQIRTRQIPPFLPIREAVNCYSRSHNRLVILGFNATLTEAVDPLGRRYGQIRDMDLKVHPDVREPLKKLCDDQNTTVVVLSGSDRSVLDDNFGDYNMWLAAENGMFLRPTKGEWMTTMPENLHMDWVESVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVRDKGINKPIDYVLCVGHFLTKDEDVYTFFEPDLPSEVPPAARTTVANPFGGVPVPKISNNGAPPSRSARLKKQRSLSILERRANSHGSAVFWRPIVQDRLSLHEGSSVLDLKGDDYFSCAVGRKRSSARYLLGSSDDVVTLVKELSECSESSLS | 942 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7393018 | 7400415 | + | CePI673135_03g006860.1 | Cec03g0686 | 198310 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0686 | 942 | Gene3D | - | 692 | 772 | - | - | |
Cec03g0686 | 942 | Coils | Coil | 26 | 46 | - | - | |
Cec03g0686 | 942 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 692 | 772 | - | - | |
Cec03g0686 | 942 | CDD | HAD_TPP | 600 | 820 | - | - | |
Cec03g0686 | 942 | Gene3D | - | 626 | 815 | IPR023214 | - | |
Cec03g0686 | 942 | NCBIfam | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 102 | 567 | IPR012766 | GO:0003825(InterPro)|GO:0005992(InterPro) | |
Cec03g0686 | 942 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like | 349 | 551 | - | - | |
Cec03g0686 | 942 | Gene3D | Glycogen Phosphorylase B; | 94 | 348 | - | - | |
Cec03g0686 | 942 | Pfam | Glycosyltransferase family 20 | 102 | 567 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cec03g0686 | 942 | CDD | GT20_TPS | 102 | 567 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cec03g0686 | 942 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 626 | 695 | - | - | |
Cec03g0686 | 942 | Gene3D | Glycogen Phosphorylase B; | 349 | 551 | - | - | |
Cec03g0686 | 942 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 94 | 348 | - | - | |
Cec03g0686 | 942 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 97 | 935 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
Cec03g0686 | 942 | Pfam | Trehalose-phosphatase | 625 | 824 | IPR003337 | GO:0005992(InterPro) | |
Cec03g0686 | 942 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 101 | 570 | - | - | |
Cec03g0686 | 942 | SUPERFAMILY | HAD-like | 601 | 931 | IPR036412 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0686 | Cec-Chr3:7393018 | Cec10g0149 | Cec-Chr10:1447625 | 1.20E-123 | dispersed | |
Cec11g1774 | Cec-Chr11:31910192 | Cec03g0686 | Cec-Chr3:7393018 | 0.00E+00 | transposed | |
Cec03g0686 | Cec-Chr3:7393018 | Cec07g0299 | Cec-Chr7:2922068 | 5.40E-121 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0686 | K16055 | - | csv:101213690 | 1751.87 |