Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0689 ATGGTAGTCGAAGAGACGATCAAAGCTACATCCACGGAAGATCTTTCTAATACCATTGCAAATCAAAACCCTAGAGGACGAGGCGGTGATGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGAGACGACGACCTTGACTCGTCCAATTTGTCGGCGGCGATAGTGCATCAGCCTCACCCTCTTGAGCACTCTTGGACCTTTTGGTTCGATAACCCATCCGCCAAGTCTAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATCTATACCTTCTCTACCGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTCAAACATAAAATTGAGCCTAAATGGGAAGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCAGTTGTTAATGTTAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCCAATGAAGCTGCGCAGGCGAGCATTGGGAAACAGTGGAAGGAGTTTCTTGATTACAATGACAGCATTGGCTTTATATTCCACGAAGATGCGAAGAAATTCGACAGACATGCAAAGAACAAATATTCGGAATTTGTGGAAATCGCCATTGCTCATAACAAGCACCTGAATCTCAGATTCTTGTTCTATTGGTTTCTGAAGCGGACAAAACCTCCGAAGAGCTATCGACCGTGTCGAGCAATGGGGATTCAGGGGCTGTTACCGCTACTGAAATCAATTATGTTGCCGATCCATATTAAGGATTTGGAGGGTTCTTCTGTGGCGATCGATACCTATTCTTGGCTCCACAAAGGCGCTTTCTCCTGCAGCAAAGAGCTCTGCAATGCCCTTCCCACCTCCAAGCACATAGATTACTGTATGCATAGAATAAATCTACTCCGGCACTATGGAGTGAAACCCGTTCTTGTCTTTGATGGAGGTCTACTTCCGATGAAGAATGAGCAAGAAATCAAGCGTGCGAGGACGAGAAAAGAAAATCTCGCACGTGCAATAGAACATGAGGCGAATGGAAATTCTGCTGCTGCCTATGAGTGTTACCAGAAGGCTGTTGATATAACGCCCTTGATCGCCCATGAACTAATTCAAGTGTTAAAGCGAGAGAATATATCATATGTTGTGGCACCTTATGAGGCAGATGCTCAGATGACCTTTTTGGCCATCAGCAATCAGGTTGATGCTGTTCTTACCGAGGACTCTGATCTCATACCATTTGGCTGTCCAAGGATTATCTTTAAAATGGACAAATTTGGACAAGGAGTTGAGTTTCGATATGACATGTTACAAAAGAACAAGGACTTGAATTTTGCTGGATTTACAAAACAGATGGTTCTTGAGATGTGCATTTTGAGTGGTTGTGATTATTTGCCATCATTGCCAGGAATGGGACTTAAAAGGGCTCATGCACTTGTCAAAAAATTTTTAAGTTATGACAAGGTGATTAGACACTTGAGGTACAGCACAGTTTCAGTTCCTCATCTGTATGAAGAATCATTCAAGAAAGCGATATTGACTTTTCAGCATCAACGGGTTTACGACCCTATCACTGAAGAAATCGTACATCTATCCCAAATATCCAGCCATATAGGAGATGACTTGGATTTCTTGGGCCCATATCCTTTTCTTTGGAGCTCATTCCAATTTTCTGAGCAGAATATCAACACCGGAGTCGCGCATGAAAGACCTTACATATTAAAAGAATTTAACCCTGGAAGTGTAAAGAAAAAGTTGGATATACCTGTGCAGAAGAATGTCCTCACGAAATACTTTTGTTTTGCTTCTCTTGAGGCCAAGAGAAAATTTAGGGCGCCAAAACAATCAGCTAATCAACCAAGCTTCAGGGATGACACCTCAATTGGTGCCGAGGAGCCAGTTGGTCCTGAAGATAGTTGCTCGCCAGCTTCTACCAATCACGGTGAAAATGTAGAGGGCTGTCCATCTACTTATCCTGTAAGAAATGATAATGCAGATGGATTTCCTCTTTCTGATTCTTGCAATCAGAGTAAGGATATGGTCAATAATAAGATGGAAGAAGCGAAGCATATTTTACTTCAGCAACACACTCGATCAATTCATAAGCCTTGTGTAACTCTGCATAAGAAACCCGATTGTGAGAAGTTTCCCGATACAACTGGGGAAAAAGTGAGGAAAGAGAACAAAAGGGTCATTGTGAGGAGTTCTTACTTCAAGCATAAGCCAGAAAGCAATGATGAACAGGAGAACAACCAAAAGCTTTCTGACCAGAAAAATGCAGATGTTGCTGTGCATGAGATAACCACTCCCGAGGTTGCCTCTTTTATTAGTAGTTCTTGTGACGGTTCAATCACTAAAAGGAAAGCCTCTCCAAATGAAAGCATTCAAATGGACAATGTGAAAACGAAACATTTGTGTAAGGATACATCGCAAGCTGATCATGATGAAACAGTACTGGAGACAAAAAGTGAAGAAGGGAAGTTTGGATCCAACATTTCTCATTTAAGTCATTACTCAGACATAGCAGAGAAATCAATGGAACGATTTGTTTCAGTAATATCATCATTTCGATTTGCTTCGGGTTCTCGAGCCAGCGGTCTCCGAGCCCCTTTGAGAGATGTTCAGAACAGCAATACCAATAGGTCTACTGCTGCAATGGACTTTAGCCAATTTTCTTATGTACCAAATAAGCACAGGGACCCCTTGCAATTCCGAAAAGGAAGACGATGA 2832 42.51 MVVEETIKATSTEDLSNTIANQNPRGRGGDEDEELEEGEIVGDDDLDSSNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHEDAKKFDRHAKNKYSEFVEIAIAHNKHLNLRFLFYWFLKRTKPPKSYRPCRAMGIQGLLPLLKSIMLPIHIKDLEGSSVAIDTYSWLHKGAFSCSKELCNALPTSKHIDYCMHRINLLRHYGVKPVLVFDGGLLPMKNEQEIKRARTRKENLARAIEHEANGNSAAAYECYQKAVDITPLIAHELIQVLKRENISYVVAPYEADAQMTFLAISNQVDAVLTEDSDLIPFGCPRIIFKMDKFGQGVEFRYDMLQKNKDLNFAGFTKQMVLEMCILSGCDYLPSLPGMGLKRAHALVKKFLSYDKVIRHLRYSTVSVPHLYEESFKKAILTFQHQRVYDPITEEIVHLSQISSHIGDDLDFLGPYPFLWSSFQFSEQNINTGVAHERPYILKEFNPGSVKKKLDIPVQKNVLTKYFCFASLEAKRKFRAPKQSANQPSFRDDTSIGAEEPVGPEDSCSPASTNHGENVEGCPSTYPVRNDNADGFPLSDSCNQSKDMVNNKMEEAKHILLQQHTRSIHKPCVTLHKKPDCEKFPDTTGEKVRKENKRVIVRSSYFKHKPESNDEQENNQKLSDQKNADVAVHEITTPEVASFISSSCDGSITKRKASPNESIQMDNVKTKHLCKDTSQADHDETVLETKSEEGKFGSNISHLSHYSDIAEKSMERFVSVISSFRFASGSRASGLRAPLRDVQNSNTNRSTAAMDFSQFSYVPNKHRDPLQFRKGRR 943
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7427330 7436737 - CePI673135_03g006890.1 Cec03g0689 198313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0689 943 MobiDBLite consensus disorder prediction 770 788 - -
Cec03g0689 943 MobiDBLite consensus disorder prediction 770 793 - -
Cec03g0689 943 SMART xpgn3 272 370 IPR006085 GO:0004518(InterPro)
Cec03g0689 943 CDD PIN_EXO1 272 473 IPR044752 GO:0046872(InterPro)
Cec03g0689 943 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 483 598 IPR036279 -
Cec03g0689 943 FunFam Eukaryotic translation initiation factor 4E 51 235 - -
Cec03g0689 943 MobiDBLite consensus disorder prediction 646 703 - -
Cec03g0689 943 Pfam XPG I-region 412 497 IPR006086 GO:0004518(InterPro)
Cec03g0689 943 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cec03g0689 943 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cec03g0689 943 SMART xpgineu 409 479 IPR006086 GO:0004518(InterPro)
Cec03g0689 943 SUPERFAMILY eIF4e-like 56 231 IPR023398 -
Cec03g0689 943 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 272 894 IPR006084 GO:0017108(PANTHER)
Cec03g0689 943 Gene3D - 272 478 - -
Cec03g0689 943 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 344 363 IPR006084 -
Cec03g0689 943 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 408 425 IPR006084 -
Cec03g0689 943 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 429 449 IPR006084 -
Cec03g0689 943 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 295 309 IPR006084 -
Cec03g0689 943 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 487 502 IPR006084 -
Cec03g0689 943 Gene3D RNA Cap, Translation Initiation Factor Eif4e 52 235 IPR023398 -
Cec03g0689 943 MobiDBLite consensus disorder prediction 1 36 - -
Cec03g0689 943 MobiDBLite consensus disorder prediction 908 924 - -
Cec03g0689 943 SUPERFAMILY PIN domain-like 273 497 IPR029060 -
Cec03g0689 943 MobiDBLite consensus disorder prediction 9 24 - -
Cec03g0689 943 Pfam XPG N-terminal domain 272 369 IPR006085 GO:0004518(InterPro)
Cec03g0689 943 ProSitePatterns XPG protein signature 1. 342 356 IPR019974 GO:0016788(InterPro)
Cec03g0689 943 CDD H3TH_EXO1 485 556 IPR037315 GO:0003677(InterPro)|GO:0035312(InterPro)
Cec03g0689 943 FunFam Exonuclease 1, putative 272 478 - -
Cec03g0689 943 Gene3D - 481 552 - -
Cec03g0689 943 MobiDBLite consensus disorder prediction 908 943 - -
Cec03g0689 943 SMART HhH_4 484 517 IPR008918 GO:0003677(InterPro)|GO:0003824(InterPro)
Cec03g0689 943 FunFam exonuclease 1 480 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1617 Cec-Chr1:30823234 Cec03g0689 Cec-Chr3:7427330 1.50E-68 dispersed
Cec03g0689 Cec-Chr3:7427330 Cec06g0750 Cec-Chr6:8776806 4.50E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0689 K10746 - csv:101214177 1199.5