Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0717 | ATGGCGGCCTCAACAATGGCTCTGTCCTCGCCCTCACTCGCCGGAAAGGCGGTGAAACTTACGCCCTCCTCCCCTGAGCTTCTCGGCAATGGCAGAGTCACCTCCGTCCTACCTCACCGGAGAACTCCCGGAGACTACGGTTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATCCACTCTAGGTGGGCCATGCTCGGAGCGTTGGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAACGGCGTGAAGTTTGGAGAAGCAGTGTGGTTCAAGGCGGGTTCACAAATCTTCAGCGAAGGTGGGCTGGACTACTTGGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCATGGGGGCCGTCGAGGGATACCGTATAGCCGGTGGCCCACTTGGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGGTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTCGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA | 705 | 56.74 | MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVTSVLPHRRTPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7759761 | 7761953 | - | CePI673135_03g007170.1 | Cec03g0717 | 198341 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0717 | 234 | Gene3D | Chlorophyll a/b binding protein domain | 34 | 227 | - | - | |
Cec03g0717 | 234 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 41 | 234 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Cec03g0717 | 234 | SUPERFAMILY | Chlorophyll a-b binding protein | 41 | 231 | - | - | |
Cec03g0717 | 234 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 30 | 227 | - | - | |
Cec03g0717 | 234 | Pfam | Chlorophyll A-B binding protein | 42 | 201 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0717 | Cec-Chr3:7759761 | Cec04g2142 | Cec-Chr4:39269986 | 1.50E-120 | dispersed | |
Cec03g0717 | Cec-Chr3:7759761 | Cec03g0718 | Cec-Chr3:7765592 | 2.10E-13 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0717 | K08912 | - | csv:101211276 | 429.483 |