Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0717 ATGGCGGCCTCAACAATGGCTCTGTCCTCGCCCTCACTCGCCGGAAAGGCGGTGAAACTTACGCCCTCCTCCCCTGAGCTTCTCGGCAATGGCAGAGTCACCTCCGTCCTACCTCACCGGAGAACTCCCGGAGACTACGGTTGGGATACTGCCGGACTTTCCGCAGACCCTGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATCCACTCTAGGTGGGCCATGCTCGGAGCGTTGGGCTGCGTGTTCCCGGAGCTTCTTTCCCGCAACGGCGTGAAGTTTGGAGAAGCAGTGTGGTTCAAGGCGGGTTCACAAATCTTCAGCGAAGGTGGGCTGGACTACTTGGGGAACCCGAGCTTGATCCACGCCCAAAGCATTCTAGCCATTTGGGCCTCTCAGGTGGTTCTCATGGGGGCCGTCGAGGGATACCGTATAGCCGGTGGCCCACTTGGGGAAGTGACCGACCCGATTTACCCGGGTGGGAGCTTTGACCCGTTGGGGCTTGCAGATGACCCGGAAGCCTTTGCAGAGCTGAAAGTGAAGGAGGTGAAGAATGGAAGATTGGCGATGTTCTCTATGTTTGGATTCTTCGTTCAAGCCATCGTCACCGGAAAGGGCCCACTTGAGAATCTTGCCGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACCAACTTTGTTCCTGGAAAATGA 705 56.74 MAASTMALSSPSLAGKAVKLTPSSPELLGNGRVTSVLPHRRTPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7759761 7761953 - CePI673135_03g007170.1 Cec03g0717 198341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0717 234 Gene3D Chlorophyll a/b binding protein domain 34 227 - -
Cec03g0717 234 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 41 234 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cec03g0717 234 SUPERFAMILY Chlorophyll a-b binding protein 41 231 - -
Cec03g0717 234 FunFam Chlorophyll a-b binding protein, chloroplastic 30 227 - -
Cec03g0717 234 Pfam Chlorophyll A-B binding protein 42 201 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0717 Cec-Chr3:7759761 Cec04g2142 Cec-Chr4:39269986 1.50E-120 dispersed
Cec03g0717 Cec-Chr3:7759761 Cec03g0718 Cec-Chr3:7765592 2.10E-13 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0717 K08912 - csv:101211276 429.483