Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0761 ATGGACGGCAGCGCTGGGAGGTCGAAGGCGTTGAGTTCGAGCAATGGTGGCAGAACCCGCGTGGGAAAATACCAGTTGGGTAGAACTCTTGGCGAGGGTAACTTCGCCAAGGTCAAGTTTGCTCGGAATTCCGAGACCGGGGAGAACGTGGCGATCAAAATTCTTGACAAGGAGAAAGTTCTAAAGCATAAGATGATCAGTCAGATTAAACGCGAGATATCAACGATGAAATTAATTAGGCATCCAAATGTCATCCGTATGTTTGAGGTGATGGCTAGCAAGACCAAAATATATATTGTGTTGGAGTTTGTTACCGGTGGGGAACTATTTGACAAGATTGTTAGTAGAGGCAGAATGAAGGAAGATGAAGCAAGAAAGTATTTCCAGCAGCTTATTAATGCGGTGGATTATTGTCATAGCAGAGGTGTTTTTCATAGAGATCTAAAGCCAGAGAATTTGCTGCTTGATGCTAATGGCGTTCTTAAAGTTTCAGATTTTGGTTTGAGTGCACTACCTCAGCAAGTTCGGGAAGATGGATTACTGCACACAACATGTGGGACACCAAATTATGTTGCTCCAGAGGTGATCAATGATAAAGGCTATGACGGGGCAAAGGCTGACTTGTGGTCATGTGGTGTAATTCTTTTTGTTTTAATGGCTGGTTATTTACCCTTTGAAGATTCCAACCTGGTTGCTTTGTATAAGAAGATACACAAGGCTGACTTCACTAGTCCACCATGGTTCTCTACAAACGCAAAGAAACTTATCAAAAGAATTCTGGATCCCAATCCCTCAACGAGAATTACCATTCCAGAGGTCATTGAGAATGAATGGTTTAGAAAAGGTTACAAGCCGCCTACTTTTGAACACGCTGATATAAGTCTTGATGATGTGGACGCTATTTTCAATGAAACAGGGGATTCGGGTAGTCTCGTTGTGGAAAGAAAAGAGGAAGGATCTAAAGCCCCTCTTGCAATGAATGCATTTGAGCTTATCTCTAAATCTCAAGGCCTCAACCTCAGTTCTCTTTTTGAGAAACAAATGGGGATTGTTAAGCGGGAAACCAGGTTCACATCCAATCGACCTGCCAAAGAGATCCTTTCTAAAATTGAGGAAACTGCAGCACCTTTGGGTTTTGATGTCAAGAAAAATAACTATAAGATGAAACTTCAAGGTGAAAAAACAGGTCGTAAAGGCCATTTATCAGTTGCAACAGAGATTTATGAGGTTGCTCCGTCACTGTACATGGTTGAGCTCCGCAAGGCTGGAGGAGATACATTAGAATTTCACAAGTTTTATAAGAACCTCAAGACTGGGCTGAAAGACATTGTCTGGAAACATGAAGAAGATCCGGACGAAGGAGATAGTGGTGCAAGTGTCTCGCAGTCGAGCGTGGAAGATCATTTTAGTAAGAACGCAATGTAG 1425 42.46 MDGSAGRSKALSSSNGGRTRVGKYQLGRTLGEGNFAKVKFARNSETGENVAIKILDKEKVLKHKMISQIKREISTMKLIRHPNVIRMFEVMASKTKIYIVLEFVTGGELFDKIVSRGRMKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINDKGYDGAKADLWSCGVILFVLMAGYLPFEDSNLVALYKKIHKADFTSPPWFSTNAKKLIKRILDPNPSTRITIPEVIENEWFRKGYKPPTFEHADISLDDVDAIFNETGDSGSLVVERKEEGSKAPLAMNAFELISKSQGLNLSSLFEKQMGIVKRETRFTSNRPAKEILSKIEETAAPLGFDVKKNNYKMKLQGEKTGRKGHLSVATEIYEVAPSLYMVELRKAGGDTLEFHKFYKNLKTGLKDIVWKHEEDPDEGDSGASVSQSSVEDHFSKNAM 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8350328 8359638 + CePI673135_03g007610.1 Cec03g0761 198385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0761 474 MobiDBLite consensus disorder prediction 456 474 - -
Cec03g0761 474 CDD STKc_SnRK3 23 278 - -
Cec03g0761 474 Gene3D Kinase associated domain 1, KA1 320 446 - -
Cec03g0761 474 CDD CIPK_C 327 442 - -
Cec03g0761 474 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Cec03g0761 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0761 474 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524(InterPro)
Cec03g0761 474 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0761 474 MobiDBLite consensus disorder prediction 1 23 - -
Cec03g0761 474 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Cec03g0761 474 Pfam NAF domain 323 383 IPR004041 GO:0007165(InterPro)
Cec03g0761 474 Gene3D Transferase(Phosphotransferase) domain 1 104 286 - -
Cec03g0761 474 SUPERFAMILY Protein kinase-like (PK-like) 21 288 IPR011009 -
Cec03g0761 474 ProSiteProfiles NAF domain profile. 321 345 IPR018451 GO:0007165(InterPro)
Cec03g0761 474 MobiDBLite consensus disorder prediction 448 474 - -
Cec03g0761 474 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0761 474 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 434 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cec03g0761 474 FunFam Non-specific serine/threonine protein kinase 17 321 - -
Cec03g0761 474 SMART serkin_6 24 279 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0761 474 FunFam Non-specific serine/threonine protein kinase 320 446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2536 Cec-Chr2:42398226 Cec03g0761 Cec-Chr3:8350328 2.80E-181 dispersed
Cec03g0761 Cec-Chr3:8350328 Cec08g1221 Cec-Chr8:24123399 1.70E-147 dispersed
Cec05g0056 Cec-Chr5:603829 Cec03g0761 Cec-Chr3:8350328 2.20E-175 transposed
Cec03g0761 Cec-Chr3:8350328 Cec04g2187 Cec-Chr4:39634959 1.10E-210 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71841 PF00069 Pkinase 5.60E-75 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0761 - - - 0.0