Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0767 ATGAGGCTCTCTGCAGGTGGTTTTAGTCCTCAGGCTCAGGAAGGTGAGAGGAGGGTCCTGAATTCCGAGCTTTGGCATGCGTGCGCTGGTCCTCTTGTTTCTCTGCCGGCTGTTGGCAGTCGCGTTGTCTATTTTCCTCAAGGTCATAGTGAGCAGGTTGCTGCATCTACCAATAAAGAGGTGGATGCCCAGATACCGAATTACCCGAGTTTACCGCCGCAGCTCATTTGTCAGCTTCACAATCTGACAATGCATGCAGATGCTGAGACAGATGAAGTATATGCTCAGATGACTCTGCAACCCTTGAGTGCTCAAGAATTGAAGGAAGCCTACCTTCCAGCCGAGTTGGGAACTCCAAGTAGGCAGCCAACGAATTACTTTTGCAAAACTTTGACGGCCAGTGATACCAGCACACATGGAGGTTTTTCTGTTCCTCGCCGTGCTGCTGAAAAAGTATTCCCTCCTTTGGACTTCTCTATGCAGCCCCCAGCCCAAGAGCTGATTGCGAGGGACCTACACGATAATGAGTGGAAATTTAGACACATATTTCGCGGCCAGCCTAAAAGACACCTTCTAACAACTGGATGGAGTGTCTTCGTGAGTGCTAAAAGACTTGTTGCTGGTGATGCTGTACTTTTTATCTGGAATGAAAAGAATCAATTACTCCTCGGAATTAGGCGTGCAAGTCGACCACAAACCGTGATGCCTTCATCTGTGTTGTCAAGTGATAGCATGCATTTAGGGCTTCTTGCTGCAGCATCTCATGCAGCTGCTACCATCAGTCGGTTTACAATATTTTTTAACCCAAGGGCTAGCCCTTCAGAGTTTGTCATACCTCTGACCAAATATGTGAAGGCAGTCTACCATACACGTGTTTCTGTTGGCATGCGCTTTAGGATGCTGTTTGAAACGGAAGAATCAAGTGTTCGTCGCTACATGGGCACAATCACTGGCATTAGTGACTTGGATCCTGTAAGATGGCAAAACTCCCATTGGCGCTCGGTCAAGGTTGGCTGGGACGAGTCAACAGCAGGAGAACGGCAGCCAAGAGTTTCCTTGTGGGAAATTGAACCACTGACAACATTTCCAATGTATCCATCACCATTTCCACTTAGGCTGAAGCGACCATGGCCAACTGGATTGCCTTCTTTCGGCATCAAGGATAGTGACCTCGGAATGAATTCTCCATTCATGTGGCTACGGGGAGATAATAGTGATCGTGGCATCCAGTGTCTAAACTTTCAGGGAACTGGGGTCTCACCATGGATGCAGCCAAGGCTTGATCCATCCATGATGGGTATGCAGTCTGACATGTATCAAGCCATGGCTACTGCAGCTCTTCAGGAGATGAGGGCAATTGATTATTCCAAAATAGCACCTGCATCCGTTCTGCAATTCCAGCAGCCCCAAGGTCTTCCTTGTCAGTCTTCTACTTTAATGCAGCCTCAGATGTTGCATCAGTCTCAACCTCAGCAGGCGTTTCTACAATCCGTTCAAGAAAACCAGCAGCATTCTGAGTCTCAGTCTCAGGCTCAAACTCAGTCGCATCATCTTCAGCCACAATTGCAGCCCCAACAATCGTTCAATAATCAACAACAGCAGCATCAACAGCAACCAAGGCAGGCACAGCCACTCGATCATCAGCAGATTCCTTGTACAATCCCTGCTATATCTCAGTTTGCTTCATGTTCTCAATCTCAGTCACCGTCCCTGCAAACCGTCCCTTCCCTTTGCCAACAACCAGGTTTTTCTGATTCCAACGGTAACCCTGTAACTAGTCCTACTGTTTCCCCATTACATAGCCTTGCGGGTTCATTTGGCCAAGATGACTCGGCCCAGCTGCTTAACCTTCAAAGAGCACATTCGGTAATTCCTTCAGCTGGTTGGCCATCAAAGAGAGCTGCTATTGATCCTCTCTGTACTGGAGCTGCTCAATATTTTCTACCTCAAGTGGAAATTTTGGGAACACCACAGAGTAGTATTTCTCAGAATACTGTTGCATTGCCACCTTTCCCCGGAAGGGAGTGTCCTATTGATGACCGAGATGAGGGTTCTGATCCACAAAACCATGTTTTATTTGGTGTGAATATAGAATCTTCATCCCTTCTAATGCAGAATGGGATGTCAAACCTTAGGGGTGTCGGCAATGATAGTGTTTCTACAACTCTACCTTTTTCTTCCAATTATATGAGCACTGCTGGAACCAATTTTTCTGTAAATCCAACCATGACATCCTCAAATTGCATCGACGAATCGGGTTTCCTGCAGTCTCATGAAAATGTGGGCCAAGTAAACCCACCCAACGGAACCTTTGTCAAGGTTCATAAATCGGGGACCTACAGTAGGTCGTTAGATATAACCAAATTCAACAGCTATCCTGAGCTACGCAGCGAGCTTGCTCGCATGTTTGGCCTAGAAGGCGAGTTGGAGGATCCTTTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGAATGACGTTCTTCTCCTCGGCGATGGCCCATGGCCGGAGTTTGTAAACAGTGTGTGGTGTATCAAAATACTTTCACCAGAAGAAGTTCAGGACATGGGCAAACGAGGTTTAGAACTTCTGAACTCTGTGCCAATTCAGAGGCTCTCGAACAGCACCTGTGACGACTATGGTAGCCGACAGGACTCGAGAAATTTGATTTCAGGGATAACCTCCGTCGGGGCTCTTGACTACTGA 2709 47.4 MRLSAGGFSPQAQEGERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAASHAAATISRFTIFFNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGTGVSPWMQPRLDPSMMGMQSDMYQAMATAALQEMRAIDYSKIAPASVLQFQQPQGLPCQSSTLMQPQMLHQSQPQQAFLQSVQENQQHSESQSQAQTQSHHLQPQLQPQQSFNNQQQQHQQQPRQAQPLDHQQIPCTIPAISQFASCSQSQSPSLQTVPSLCQQPGFSDSNGNPVTSPTVSPLHSLAGSFGQDDSAQLLNLQRAHSVIPSAGWPSKRAAIDPLCTGAAQYFLPQVEILGTPQSSISQNTVALPPFPGRECPIDDRDEGSDPQNHVLFGVNIESSSLLMQNGMSNLRGVGNDSVSTTLPFSSNYMSTAGTNFSVNPTMTSSNCIDESGFLQSHENVGQVNPPNGTFVKVHKSGTYSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQDMGKRGLELLNSVPIQRLSNSTCDDYGSRQDSRNLISGITSVGALDY 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8512698 8518069 - CePI673135_03g007670.1 Cec03g0767 198391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0767 902 ProSiteProfiles PB1 domain profile. 769 853 IPR053793 -
Cec03g0767 902 Pfam Auxin response factor 253 335 IPR010525 GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Cec03g0767 902 MobiDBLite consensus disorder prediction 574 593 - -
Cec03g0767 902 Gene3D - 291 363 - -
Cec03g0767 902 FunFam Auxin response factor 291 363 - -
Cec03g0767 902 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 20 860 IPR044835 GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Cec03g0767 902 FunFam Auxin response factor 765 858 - -
Cec03g0767 902 CDD B3_DNA 126 227 IPR003340 GO:0003677(InterPro)
Cec03g0767 902 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677(InterPro)
Cec03g0767 902 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677(InterPro)
Cec03g0767 902 Pfam AUX/IAA family 763 858 IPR033389 -
Cec03g0767 902 SUPERFAMILY CAD & PB1 domains 759 844 - -
Cec03g0767 902 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Cec03g0767 902 MobiDBLite consensus disorder prediction 497 546 - -
Cec03g0767 902 SMART B3_2 127 229 IPR003340 GO:0003677(InterPro)
Cec03g0767 902 Gene3D - 767 858 - -
Cec03g0767 902 Gene3D - 125 228 IPR015300 -
Cec03g0767 902 FunFam Auxin response factor 125 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0836 Cec-Chr1:9377175 Cec03g0767 Cec-Chr3:8512698 6.30E-93 dispersed
Cec01g0837 Cec-Chr1:9394576 Cec03g0767 Cec-Chr3:8512698 2.70E-61 dispersed
Cec01g0839 Cec-Chr1:9405712 Cec03g0767 Cec-Chr3:8512698 1.30E-90 dispersed
Cec03g0767 Cec-Chr3:8512698 Cec11g0145 Cec-Chr11:1706992 3.50E-170 dispersed
Cec05g2034 Cec-Chr5:32279183 Cec03g0767 Cec-Chr3:8512698 3.70E-173 transposed
Cec03g0767 Cec-Chr3:8512698 Cec04g2197 Cec-Chr4:39695644 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29217 PF02309 AUX_IAA 3.20E-07 CL0072 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0767 K14486 - csv:101211705 1656.73