Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0799 ATGACAGCCCATCGTGCCTTCCAGTTTTGTAAGGTGTATAAAAGGACAACAGAATTTCGCAGATTGTGTGAAATTATCAGGAATCATCTTGCCAACCTCAACAAGTACAGAGACCAAAGGGATCGGCCTGACCTTTCTGCTCCAGAGAGCTTGCAATTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACAGAGCTTGAGCTCTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACACCTAAACCATCCTTGATGGTGGTGTATTACGTCAAATTAACCGAGATCTTCTGGATATCCAATAGCAATCTTTATCATGCCTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATCTAAGCCAGAAGGATTTGCAGCTGATAGCTTCGTCTGTTCTTTTAGCAGCTCTTGCAGTGTCCCCCTATGACTCTAAGCATGGTGCTTCTCATTTAGAACTTGAACATGAGAAAGAGCGGAATTTGAGGATGGCCAATCTTATAGGGTTCAGCTTAGATTCCAAACTTGAAAGTAGAGATGCGCTTTCAAGGGCAAATCTTTTTTCTGAACTGGTGTCTAAAGGAGTCCTCAGCTGCGCAACTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTCTTCCCGCTTGATCTTGCAACAAAATTGCAACCCTTATTAAACAAAGTATCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCTGAAGTGCAATTGTCCCAATACGTTCCGGCTCTTGAGAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGACTATGAAAATTGAGAGTCTATCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTCATTGCCATGAAAGTTGATCATTCGAGGAACATTGTGTCATTTGACAATTTGGGTATTGAATCAGATGGGCTTCGGGACCACCTGACTGTTCTCGCTGAATCTTTAAATAAAACAAGAGCTATGATCTATCCTCCAGTTATGAAGGCATCAAAAACAAGTGATATATTGCCTGATTTGGCTGATATTGTTGATAAGGAGCATAAGAGGCTGCTTGCTCGTAAATCTATAATTGAGAAAAGGAAGGAAGAGCAGGAACGGCATCTTTTGGAAATGGAACGCGAGGAGGAATCAAGAAGGTTGAAATTACTAAAGATAACAGAAGAGGCTGAGCAGAAGCGGCTTGCTGCAGAATACGAACAAAGAAAAAACCAACGGCTTCGTAGGGAAATGGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTACAGGAAACTGAAAAACGTGTTGGTAAAAAGAAGGGAAGCAAGAAGCCGGTTCTTGACTCCGAAAAGTTGACGAAACAAACTCTAATGCAATTGGCCCTTACTGAACAATTGAGGGAGAGGCAGGAAATGGAGAAGAAACTACAAAAGCTAGCCAAAACTATGGATTATCTAGAAAGGGCAAAAAGAGAAGAGGCTGCAACGTTAATTGATGCTGCATTTCAGCAGCGATTGCTTGAAGAGAGAATGATTCATGAACGTGATCAGCAGCTAGAGGTTGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAGAAGAATCGATTGGCTAGAATGATGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCATTGGTCTTCGCCAAGAGGAATTCAGCAGGCGTAGAGCTGAGAGAGAAGAACAGATCAGGCAAATAATTCAGGCCCGGAAAGCAGAAAGGGAGGCTAAGAGGAAGAAAATCTTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTGCGCGAAGAGGAGGAAGCACGCAAGCGTGAAGAGGCCGAGAGGAGAAAGAAGGAAGAAGCTGAACGCAAGGCTAAATTGGATGAGATTGCTGAGAAGCAGAGACAGAGGGAGCGAGAATTGGAAGAAAAAGAAAGACTGAGGAAAGAAAGTCTCTTTGGTGGTGGCAGATCATCTGATGCACCTCCTAGACCTGACTTTATTCCTGCTTCTCGCCCTCTGGAGTCTGGGACTGCTGCTCCTGCCGCTGCCGCTGCTGCTGCAGCTGCCGCACCATCTCCAGCAAAATATGTCCCAAGGTTTCGACGGTCTGAAGGCTCCACCGCTGCTGCACAACCACCTGAATCTGATCGATGGGGAAGCAGCCGGCCTGATAATTGGCTATCTCAACCAGATAGCTGGCGCAGTGATGACCGTAGACCTGCATTTGGAAGTTCAAGGTCATCGTGGTCCTCATCCCGAGTTCCTACTCGTGCTAGCACGGACCGCTGA 2388 44.51 MTAHRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISNSNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVLLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFSLDSKLESRDALSRANLFSELVSKGVLSCATQEVKDLYHLLEHEFFPLDLATKLQPLLNKVSKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKISVDAVKQNFIAMKVDHSRNIVSFDNLGIESDGLRDHLTVLAESLNKTRAMIYPPVMKASKTSDILPDLADIVDKEHKRLLARKSIIEKRKEEQERHLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREMEERELEEAQALLQETEKRVGKKKGSKKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIDAAFQQRLLEERMIHERDQQLEVELSKQRHEGDLKEKNRLARMMESKKIFQERVIGLRQEEFSRRRAEREEQIRQIIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAEKQRQRERELEEKERLRKESLFGGGRSSDAPPRPDFIPASRPLESGTAAPAAAAAAAAAAPSPAKYVPRFRRSEGSTAAAQPPESDRWGSSRPDNWLSQPDSWRSDDRRPAFGSSRSSWSSSRVPTRASTDR 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9238300 9246090 + CePI673135_03g007990.1 Cec03g0799 198423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0799 795 Coils Coil 392 417 - -
Cec03g0799 795 ProSiteProfiles PCI domain profile. 140 337 IPR000717 -
Cec03g0799 795 FunFam Eukaryotic translation initiation factor 3 subunit A 92 166 - -
Cec03g0799 795 Pfam eIF3a, PCI domain, TPR-like region 2 231 IPR054711 -
Cec03g0799 795 Coils Coil 493 523 - -
Cec03g0799 795 Coils Coil 427 473 - -
Cec03g0799 795 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 786 IPR027512 GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER)
Cec03g0799 795 Coils Coil 623 682 - -
Cec03g0799 795 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 265 356 IPR000717 -
Cec03g0799 795 Gene3D - 185 318 - -
Cec03g0799 795 Gene3D - 93 167 - -
Cec03g0799 795 MobiDBLite consensus disorder prediction 638 685 - -
Cec03g0799 795 MobiDBLite consensus disorder prediction 775 795 - -
Cec03g0799 795 FunFam Eukaryotic translation initiation factor 3 subunit A 41 92 - -
Cec03g0799 795 MobiDBLite consensus disorder prediction 638 795 - -
Cec03g0799 795 Gene3D UVR domain 41 92 - -
Cec03g0799 795 Coils Coil 598 618 - -
Cec03g0799 795 FunFam Eukaryotic translation initiation factor 3 subunit A 176 318 - -
Cec03g0799 795 Pfam PCI domain 262 333 IPR000717 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0799 Cec-Chr3:9238300 Cec03g1819 Cec-Chr3:36421521 0.00E+00 dispersed
Cec03g0799 Cec-Chr3:9238300 Cec03g0800 Cec-Chr3:9266593 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0799 K03254 - csv:101209344 1204.12