Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0800 GCATCATTTCTTTCATTGAATTTGCACACATTAGCAGATCAACTTCAAAAATTAAATGTAGCACAGAGGCTCTTTATTGAGGAAGATATATTAGCATCAGAACTGCTTGCAGACGAAAAGACCGTATGTGACCAGCGGTCATCTCAGATGCAAACATCTGAGTGTCAAGGGGGAGCAAGAATTATTGAAATTTCATCTGTCACAGAGAAAGGAAACATCGAAGATGGAGTTCGAGATGTGACCATAGCTTCTTTGTCTAGCAGCTTTGGAAATATCAATCAAGATCCAACCTTCAATCCATCGCCTACTTTGTCAAATCAGGTCCATTATAATGCCCATCAAATCGAGTTGGATATATCCAGCCAACCGAAGGCGCCAAAGTATATAGAACAACCTAACACGAAGTTCACGACCGGAAATCCAAACAAAAAGGTCTCAAAGCTTGAAGCAACAACTGCAGAAGCCGAATTGGATATGCTTCTGAGCTCATTTAGTGATACAATAAACCTAGACACTGCTGCTGCGAGTAGCTTGTCTCGCATAGATGAAGTGTTTAAAGCTTCTCCTCACCTTCCAAATAAGGGTCCATATTCAACAAAGAAGACACCCATTGCTGCAGAACTTGATGATGCCTTGGATGAATTGCTTCAAGTGATGAAACCTTCTCTTCTTATCATTGAAAAGTCGCTCTCTCTCTCACAACCAGTCTCCACGTTTCCGTCGTCGAAGGTCTTTCGTGGAACTTCTGTTCGCAAGTCATTCAGCGTTGCATGCTGTCCTTGGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATATTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATGATCTTATCACTTCAAAGAAATATCGAGCATGGCAGAAGCCTCTTGAGAAGATTATGTTCAAGTATGTTGAACTGTGTGTGGATATGAGGAAAGGACGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCCTTAGAAGAAGCTCTGGACGTTGATGATTTAGAAGCTGATAAAAGACCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAAAAGGGAAAAGATAGATCTGATCGTGAACTTGTTACCCCATGGTTTAAATTTCTGTGGGAGACATATCGAACAGTTCTTGAGATACTAAGAAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTCTGTAAGGTGTACAAAAGAACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGGGATCGGCCTGATCTTTCTGCTCCAGAGAGCTTGCAATTATACCTCGACACTAGATTTGAACAGCTGAAGGTTGCCACAGAGCTTGAGCTTTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATCCATGGTTTGATGTGCATGGTGAAGAAGACACCTAAACCATCCTTGATGGTGGTGTATTATGTCAAATTAATAGAGATCTTCTGGATATCGGACAGCAATCTTTATCATGCCTATGCATGGCTTAAACTTTTCTCCATTCAGAAAAGTTTCAACAAAAATCTAAGCCAGAAGGATTTGCAGCTGATAGCTTCGTCTGTTCTTTTAGCAACTCTTGCAGTGTCCCCCTATGACTCTAAGCATGGTGCTTCCCATTTAGAACTTGAACATGAGAAAGAGCGAAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGATTCCAAACTTGAAAGTAGAGATGTGCTTTCGAGGGCGAATCTTCTTTCTGAACTGGTGTCTAAAGGAGTCCTGAGCTGCGCAATTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTTTTCCCTCTTGATCTTGCAACAAAATTGCAACCATTACTTAACAAAATATCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCCGAAGTGCAGTTGTCTCAATATGTTCCAGCTCTTGAAAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGACAATGAAAATTGAGAGTCTATCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAGATATTAGTTGATGCAGTTAAACAGAATTTCATTGCCGTGAAAGTTGATCACTCAAAGAATATTGTGTTATTTGGCAATTTGGGTATCGAATCAGATGGGCTACGAGACCACCTGACCACTCTTGCAGAATCCTTAAACAAAGCAAGAGATATGATCTATCCTCCAGTTAGGAAAGCCTCGAAAACAGGTGATATGTTACCTGATTTGGCAGATATTGTTGATAAAGAGCACAAGAGGTTGCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGAAGGTTAAAATTACTGAAGATAACTGAAGAAGCTGAGCAGAAGCGGCTTGCTGCAGAATATGAACAAAGGAAAAACCAACGGCTTCGTAGGGAAATAGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAACGTGTTGGTAAAAAGAAGGGAAGCAGGAAACCAGTTCTTGACTCTGAAAAGTTGTCGAAACAAACTTTAATGCAGTTGGCCCTTACTGAACAATTAAGGGAGAGACAAGAAATGGAGAAGAAATTACAAAAGCTAGCCAAAACCATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCTGCAACGTTAATTGAAGCTGCATTTCAGCAACGTTTGCTTGAAGAGAGAATGATCCATGAACGTAATCAGCAGCTGGAGGTTGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAGAAGAATCGATTGGCGAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTAATTAGTCTTCGCCAAGAGGAATTCAGCAAACGTAGAGCTGAGAGAGAAGAACATATCAGGCAAATAATTCAGGCTCGGAAAGCGGAAAGGGAGGCTAAGAGGAAGAAAATATTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTACGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAGGCCGAGAGGAGAAAGAAGGAAGAAGCTGAACGCAAAGCTAAATTGGATGAGATTGCTGAGAAGCAGAGACAGAGGGAGCGAGAATTGGAAGAAAAAGAAAGACTGAGGAAAGAAAGTCTCTTTGGTGGTGGCAGATCATCTGATGCACCTCCTAGACCTGACTTTCCTCCTGCTTCTCGCCCTCTGGAGTCTGGGACTGCTGCTCCTGCCGCTGCTGCTACTGCTGCAGCTGCCGCACCATCTCCAGCAAAATATGTCCCAAGGTTTCGACGGTCTGAAGGCTCCACCGCTACTGCACCACCACCTGAATCTGATCGATGGGGAAGCAGCCGGCCTGATAATCGGCCATCTCAACCAGATAGCTGGCGCAGTGATGACCGTAGACCTGCATTTGGAAGTTCAAGGTCATCGTGGTCCTCATCCCGAGTTCCTACTCGTACCAGCACGGACCGCTGA 3681 42.76 ASFLSLNLHTLADQLQKLNVAQRLFIEEDILASELLADEKTVCDQRSSQMQTSECQGGARIIEISSVTEKGNIEDGVRDVTIASLSSSFGNINQDPTFNPSPTLSNQVHYNAHQIELDISSQPKAPKYIEQPNTKFTTGNPNKKVSKLEATTAEAELDMLLSSFSDTINLDTAAASSLSRIDEVFKASPHLPNKGPYSTKKTPIAAELDDALDELLQVMKPSLLIIEKSLSLSQPVSTFPSSKVFRGTSVRKSFSVACCPWPENALKRAEELINIGQKQDALQALHDLITSKKYRAWQKPLEKIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLIEIFWISDSNLYHAYAWLKLFSIQKSFNKNLSQKDLQLIASSVLLATLAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCAIQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKILVDAVKQNFIAVKVDHSKNIVLFGNLGIESDGLRDHLTTLAESLNKARDMIYPPVRKASKTGDMLPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLSKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIHERNQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFSKRRAEREEHIRQIIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAEKQRQRERELEEKERLRKESLFGGGRSSDAPPRPDFPPASRPLESGTAAPAAAATAAAAAPSPAKYVPRFRRSEGSTATAPPPESDRWGSSRPDNRPSQPDSWRSDDRRPAFGSSRSSWSSSRVPTRTSTDR 1226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 9266593 9279594 - CePI673135_03g008000.1 Cec03g0800 198424
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0800 1226 Coils Coil 987 1007 - -
Cec03g0800 1226 Gene3D - 618 749 - -
Cec03g0800 1226 Gene3D - 524 598 - -
Cec03g0800 1226 Coils Coil 348 375 - -
Cec03g0800 1226 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 262 1217 IPR027512 GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER)
Cec03g0800 1226 FunFam Eukaryotic translation initiation factor 3 subunit A 607 749 - -
Cec03g0800 1226 MobiDBLite consensus disorder prediction 1069 1226 - -
Cec03g0800 1226 Pfam eIF3a, PCI domain, TPR-like region 263 662 IPR054711 -
Cec03g0800 1226 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 696 787 IPR000717 -
Cec03g0800 1226 ProSiteProfiles PCI domain profile. 571 768 IPR000717 -
Cec03g0800 1226 FunFam Eukaryotic translation initiation factor 3 subunit A 472 523 - -
Cec03g0800 1226 Pfam PCI domain 693 763 IPR000717 -
Cec03g0800 1226 Coils Coil 1029 1049 - -
Cec03g0800 1226 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 257 1201 IPR027512 GO:0005852(InterPro)
Cec03g0800 1226 MobiDBLite consensus disorder prediction 1206 1226 - -
Cec03g0800 1226 MobiDBLite consensus disorder prediction 1069 1116 - -
Cec03g0800 1226 FunFam Eukaryotic translation initiation factor 3 subunit A 523 597 - -
Cec03g0800 1226 Coils Coil 816 855 - -
Cec03g0800 1226 Coils Coil 1054 1113 - -
Cec03g0800 1226 Coils Coil 858 904 - -
Cec03g0800 1226 Gene3D UVR domain 472 523 - -
Cec03g0800 1226 Coils Coil 924 954 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0248 Cec-Chr2:2337237 Cec03g0800 Cec-Chr3:9266593 7.90E-93 dispersed
Cec03g0800 Cec-Chr3:9266593 Cec03g1819 Cec-Chr3:36421521 0.00E+00 dispersed
Cec03g0799 Cec-Chr3:9238300 Cec03g0800 Cec-Chr3:9266593 0.00E+00 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0800 K03254 - csv:101215735 1536.55