Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec03g0800 | GCATCATTTCTTTCATTGAATTTGCACACATTAGCAGATCAACTTCAAAAATTAAATGTAGCACAGAGGCTCTTTATTGAGGAAGATATATTAGCATCAGAACTGCTTGCAGACGAAAAGACCGTATGTGACCAGCGGTCATCTCAGATGCAAACATCTGAGTGTCAAGGGGGAGCAAGAATTATTGAAATTTCATCTGTCACAGAGAAAGGAAACATCGAAGATGGAGTTCGAGATGTGACCATAGCTTCTTTGTCTAGCAGCTTTGGAAATATCAATCAAGATCCAACCTTCAATCCATCGCCTACTTTGTCAAATCAGGTCCATTATAATGCCCATCAAATCGAGTTGGATATATCCAGCCAACCGAAGGCGCCAAAGTATATAGAACAACCTAACACGAAGTTCACGACCGGAAATCCAAACAAAAAGGTCTCAAAGCTTGAAGCAACAACTGCAGAAGCCGAATTGGATATGCTTCTGAGCTCATTTAGTGATACAATAAACCTAGACACTGCTGCTGCGAGTAGCTTGTCTCGCATAGATGAAGTGTTTAAAGCTTCTCCTCACCTTCCAAATAAGGGTCCATATTCAACAAAGAAGACACCCATTGCTGCAGAACTTGATGATGCCTTGGATGAATTGCTTCAAGTGATGAAACCTTCTCTTCTTATCATTGAAAAGTCGCTCTCTCTCTCACAACCAGTCTCCACGTTTCCGTCGTCGAAGGTCTTTCGTGGAACTTCTGTTCGCAAGTCATTCAGCGTTGCATGCTGTCCTTGGCCAGAGAATGCTTTAAAACGAGCTGAAGAGCTGATAAATATTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATGATCTTATCACTTCAAAGAAATATCGAGCATGGCAGAAGCCTCTTGAGAAGATTATGTTCAAGTATGTTGAACTGTGTGTGGATATGAGGAAAGGACGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAGCAAGTCAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTTTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCCTTAGAAGAAGCTCTGGACGTTGATGATTTAGAAGCTGATAAAAGACCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAAAAGGGAAAAGATAGATCTGATCGTGAACTTGTTACCCCATGGTTTAAATTTCTGTGGGAGACATATCGAACAGTTCTTGAGATACTAAGAAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCCCATCGTGCCTTCCAGTTCTGTAAGGTGTACAAAAGAACAACAGAATTTCGCAGATTATGTGAAATTATCAGAAATCATCTTGCTAATCTCAACAAGTATAGAGACCAAAGGGATCGGCCTGATCTTTCTGCTCCAGAGAGCTTGCAATTATACCTCGACACTAGATTTGAACAGCTGAAGGTTGCCACAGAGCTTGAGCTTTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATCCATGGTTTGATGTGCATGGTGAAGAAGACACCTAAACCATCCTTGATGGTGGTGTATTATGTCAAATTAATAGAGATCTTCTGGATATCGGACAGCAATCTTTATCATGCCTATGCATGGCTTAAACTTTTCTCCATTCAGAAAAGTTTCAACAAAAATCTAAGCCAGAAGGATTTGCAGCTGATAGCTTCGTCTGTTCTTTTAGCAACTCTTGCAGTGTCCCCCTATGACTCTAAGCATGGTGCTTCCCATTTAGAACTTGAACATGAGAAAGAGCGAAATTTGAGGATGGCTAATCTTATAGGGTTCAATTTAGATTCCAAACTTGAAAGTAGAGATGTGCTTTCGAGGGCGAATCTTCTTTCTGAACTGGTGTCTAAAGGAGTCCTGAGCTGCGCAATTCAGGAAGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTTTTCCCTCTTGATCTTGCAACAAAATTGCAACCATTACTTAACAAAATATCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCCGAAGTGCAGTTGTCTCAATATGTTCCAGCTCTTGAAAAACTTGCTACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGACAATGAAAATTGAGAGTCTATCGCAGATGATCCCATTTTTTGATTTTTCTGCCGTGGAGAAGATATTAGTTGATGCAGTTAAACAGAATTTCATTGCCGTGAAAGTTGATCACTCAAAGAATATTGTGTTATTTGGCAATTTGGGTATCGAATCAGATGGGCTACGAGACCACCTGACCACTCTTGCAGAATCCTTAAACAAAGCAAGAGATATGATCTATCCTCCAGTTAGGAAAGCCTCGAAAACAGGTGATATGTTACCTGATTTGGCAGATATTGTTGATAAAGAGCACAAGAGGTTGCTTGCTCGGAAATCAATAATTGAGAAAAGGAAGGAAGAGCAGGAACGACAACTTTTGGAAATGGAACGTGAGGAGGAATCAAGAAGGTTAAAATTACTGAAGATAACTGAAGAAGCTGAGCAGAAGCGGCTTGCTGCAGAATATGAACAAAGGAAAAACCAACGGCTTCGTAGGGAAATAGAAGAGCGAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAACGTGTTGGTAAAAAGAAGGGAAGCAGGAAACCAGTTCTTGACTCTGAAAAGTTGTCGAAACAAACTTTAATGCAGTTGGCCCTTACTGAACAATTAAGGGAGAGACAAGAAATGGAGAAGAAATTACAAAAGCTAGCCAAAACCATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCTGCAACGTTAATTGAAGCTGCATTTCAGCAACGTTTGCTTGAAGAGAGAATGATCCATGAACGTAATCAGCAGCTGGAGGTTGAGTTAAGCAAGCAGCGCCATGAAGGTGACCTCAAGGAGAAGAATCGATTGGCGAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTAATTAGTCTTCGCCAAGAGGAATTCAGCAAACGTAGAGCTGAGAGAGAAGAACATATCAGGCAAATAATTCAGGCTCGGAAAGCGGAAAGGGAGGCTAAGAGGAAGAAAATATTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTACGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAGGCCGAGAGGAGAAAGAAGGAAGAAGCTGAACGCAAAGCTAAATTGGATGAGATTGCTGAGAAGCAGAGACAGAGGGAGCGAGAATTGGAAGAAAAAGAAAGACTGAGGAAAGAAAGTCTCTTTGGTGGTGGCAGATCATCTGATGCACCTCCTAGACCTGACTTTCCTCCTGCTTCTCGCCCTCTGGAGTCTGGGACTGCTGCTCCTGCCGCTGCTGCTACTGCTGCAGCTGCCGCACCATCTCCAGCAAAATATGTCCCAAGGTTTCGACGGTCTGAAGGCTCCACCGCTACTGCACCACCACCTGAATCTGATCGATGGGGAAGCAGCCGGCCTGATAATCGGCCATCTCAACCAGATAGCTGGCGCAGTGATGACCGTAGACCTGCATTTGGAAGTTCAAGGTCATCGTGGTCCTCATCCCGAGTTCCTACTCGTACCAGCACGGACCGCTGA | 3681 | 42.76 | ASFLSLNLHTLADQLQKLNVAQRLFIEEDILASELLADEKTVCDQRSSQMQTSECQGGARIIEISSVTEKGNIEDGVRDVTIASLSSSFGNINQDPTFNPSPTLSNQVHYNAHQIELDISSQPKAPKYIEQPNTKFTTGNPNKKVSKLEATTAEAELDMLLSSFSDTINLDTAAASSLSRIDEVFKASPHLPNKGPYSTKKTPIAAELDDALDELLQVMKPSLLIIEKSLSLSQPVSTFPSSKVFRGTSVRKSFSVACCPWPENALKRAEELINIGQKQDALQALHDLITSKKYRAWQKPLEKIMFKYVELCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLIEIFWISDSNLYHAYAWLKLFSIQKSFNKNLSQKDLQLIASSVLLATLAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCAIQEVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQTMKIESLSQMIPFFDFSAVEKILVDAVKQNFIAVKVDHSKNIVLFGNLGIESDGLRDHLTTLAESLNKARDMIYPPVRKASKTGDMLPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLKLLKITEEAEQKRLAAEYEQRKNQRLRREIEERELEEAQALLQEAEKRVGKKKGSRKPVLDSEKLSKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLLEERMIHERNQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVISLRQEEFSKRRAEREEHIRQIIQARKAEREAKRKKIFYVRREEERIRILREEEEARKREEAERRKKEEAERKAKLDEIAEKQRQRERELEEKERLRKESLFGGGRSSDAPPRPDFPPASRPLESGTAAPAAAATAAAAAPSPAKYVPRFRRSEGSTATAPPPESDRWGSSRPDNRPSQPDSWRSDDRRPAFGSSRSSWSSSRVPTRTSTDR | 1226 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 9266593 | 9279594 | - | CePI673135_03g008000.1 | Cec03g0800 | 198424 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec03g0800 | 1226 | Coils | Coil | 987 | 1007 | - | - | |
| Cec03g0800 | 1226 | Gene3D | - | 618 | 749 | - | - | |
| Cec03g0800 | 1226 | Gene3D | - | 524 | 598 | - | - | |
| Cec03g0800 | 1226 | Coils | Coil | 348 | 375 | - | - | |
| Cec03g0800 | 1226 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 262 | 1217 | IPR027512 | GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER) | |
| Cec03g0800 | 1226 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 607 | 749 | - | - | |
| Cec03g0800 | 1226 | MobiDBLite | consensus disorder prediction | 1069 | 1226 | - | - | |
| Cec03g0800 | 1226 | Pfam | eIF3a, PCI domain, TPR-like region | 263 | 662 | IPR054711 | - | |
| Cec03g0800 | 1226 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 696 | 787 | IPR000717 | - | |
| Cec03g0800 | 1226 | ProSiteProfiles | PCI domain profile. | 571 | 768 | IPR000717 | - | |
| Cec03g0800 | 1226 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 472 | 523 | - | - | |
| Cec03g0800 | 1226 | Pfam | PCI domain | 693 | 763 | IPR000717 | - | |
| Cec03g0800 | 1226 | Coils | Coil | 1029 | 1049 | - | - | |
| Cec03g0800 | 1226 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 257 | 1201 | IPR027512 | GO:0005852(InterPro) | |
| Cec03g0800 | 1226 | MobiDBLite | consensus disorder prediction | 1206 | 1226 | - | - | |
| Cec03g0800 | 1226 | MobiDBLite | consensus disorder prediction | 1069 | 1116 | - | - | |
| Cec03g0800 | 1226 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 523 | 597 | - | - | |
| Cec03g0800 | 1226 | Coils | Coil | 816 | 855 | - | - | |
| Cec03g0800 | 1226 | Coils | Coil | 1054 | 1113 | - | - | |
| Cec03g0800 | 1226 | Coils | Coil | 858 | 904 | - | - | |
| Cec03g0800 | 1226 | Gene3D | UVR domain | 472 | 523 | - | - | |
| Cec03g0800 | 1226 | Coils | Coil | 924 | 954 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g0248 | Cec-Chr2:2337237 | Cec03g0800 | Cec-Chr3:9266593 | 7.90E-93 | dispersed | |
| Cec03g0800 | Cec-Chr3:9266593 | Cec03g1819 | Cec-Chr3:36421521 | 0.00E+00 | dispersed | |
| Cec03g0799 | Cec-Chr3:9238300 | Cec03g0800 | Cec-Chr3:9266593 | 0.00E+00 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec03g0800 | K03254 | - | csv:101215735 | 1536.55 |