Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g0845 | ATGTTCTGTAGTTTGTTTGAGATGGACAACAATTATCAGCAAGCTGGTGATTTGACTGATGTAATTCGACTCAGTTCCGCCGCCGTTGCCGGTGGCCTCTCAGCGGAATTCTCTCTCGACCCTTCTTCCAGTGACCGAAGACTCTGGCCTCACCTAACCGCCGATGAATCTTCAATGAATTTTGGAGATCCGTTGTTGTTTCCGACTAGTAGTGCTCGAGATCCGTTTCTTCATCCTCATTTTTCTGCCTTCAATTTAGCTTCCGACGGCGGCGGTGAGGGTTTGGCGGCGGTGGACCAGCCGTCTAATTTACTTTCACATATGTTGCAGATCTCTCCGAGTTCCGGTGATGGTGTAATTAGTACTCCTCCATGTGAGTCGTTCGCCAAGGCGGTGGGGAATTCTCCGTGCTCGTCTTCAGCTTGCAGTGGCGGTGTCGTGCTTCCGACCGGTGGCTCGAATCCTTTTTGTTTAATGGAGAATTCTGGGATTCAGATCTCTTCCCCACGTAATTCCACCACTAAAAGAAGGAAGAGCCAAGTGAAGAAGGTGGTGTGCATTCCGGCACCGGGGCCGGCGAACAACCGATCAAGCAGCGGTGAAGTGGTTCCTTCTGATCTATGGGCATGGAGGAAGTACGGACAAAAGCCCATCAAAGGATCCCCATATCCAAGGGGATATTATAGGTGCAGTAGCTCAAAGGGCTGCTCCGCTCGAAAGCAGGTCGAGCGCAGTCGAACCAACCCCAACATGCTTGTCATCACCTACACCTCGGAGCACAACCACCCATGGCCCACTCAACGCAATGCTCTTGCAGGCTCAACACGCTCCCACCCTTCTCGAACCCCTACCACCCCCACCGCTCGTAAAACAAGCCCAAAACACGAGCGCACCAACAACAACCAACCAACCACAACACTAAAGGAGGAAGAGATGGATGCAGGCCAAACGACAGAAAAAGAAATAGCAGCAACAACAAACAATCATCAGGAAGATGGAGATCATCAGAATTTCCCTTATGACTTAATTTTCACTGAATTTGCTGACTATGACTACGACCACGACCATCATCATCTTTCAGCAGACCCTCTAAACAACAATATGTTGTTGTTTAGTAGCCATGGCTTTAGTACAGGAAATGGAGAAGGGAGTAAAGATCCATTTTTGGAGCTCTATGATTGGGCAGATAATTCAAATGGAAGTTTGTTCAAAGAAGCCAAGGGAGGTTGA | 1230 | 49.11 | MFCSLFEMDNNYQQAGDLTDVIRLSSAAVAGGLSAEFSLDPSSSDRRLWPHLTADESSMNFGDPLLFPTSSARDPFLHPHFSAFNLASDGGGEGLAAVDQPSNLLSHMLQISPSSGDGVISTPPCESFAKAVGNSPCSSSACSGGVVLPTGGSNPFCLMENSGIQISSPRNSTTKRRKSQVKKVVCIPAPGPANNRSSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTNPNMLVITYTSEHNHPWPTQRNALAGSTRSHPSRTPTTPTARKTSPKHERTNNNQPTTTLKEEEMDAGQTTEKEIAATTNNHQEDGDHQNFPYDLIFTEFADYDYDHDHHHLSADPLNNNMLLFSSHGFSTGNGEGSKDPFLELYDWADNSNGSLFKEAKGG | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 10260934 | 10264508 | + | CePI673135_03g008450.1 | Cec03g0845 | 198469 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g0845 | 409 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 17 | 329 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER) | |
Cec03g0845 | 409 | MobiDBLite | consensus disorder prediction | 297 | 311 | - | - | |
Cec03g0845 | 409 | Gene3D | WRKY domain | 177 | 258 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec03g0845 | 409 | ProSiteProfiles | WRKY domain profile. | 199 | 265 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec03g0845 | 409 | SMART | WRKY_cls | 204 | 264 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec03g0845 | 409 | FunFam | probable WRKY transcription factor 14 | 177 | 258 | - | - | |
Cec03g0845 | 409 | Pfam | WRKY DNA -binding domain | 206 | 263 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec03g0845 | 409 | SUPERFAMILY | WRKY DNA-binding domain | 202 | 265 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec03g0845 | 409 | MobiDBLite | consensus disorder prediction | 259 | 316 | - | - | |
Cec03g0845 | 409 | MobiDBLite | consensus disorder prediction | 259 | 289 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g0664 | Cec-Chr3:7170652 | Cec03g0845 | Cec-Chr3:10260934 | 3.80E-30 | dispersed | |
Cec03g0845 | Cec-Chr3:10260934 | Cec04g2251 | Cec-Chr4:40147310 | 9.40E-54 | dispersed | |
Cec03g0845 | Cec-Chr3:10260934 | Cec01g0090 | Cec-Chr1:744261 | 5.00E-31 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29221 | PF03106 | WRKY | 4.20E-25 | CL0274 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g0845 | - | - | - | 0.0 |