Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0845 ATGTTCTGTAGTTTGTTTGAGATGGACAACAATTATCAGCAAGCTGGTGATTTGACTGATGTAATTCGACTCAGTTCCGCCGCCGTTGCCGGTGGCCTCTCAGCGGAATTCTCTCTCGACCCTTCTTCCAGTGACCGAAGACTCTGGCCTCACCTAACCGCCGATGAATCTTCAATGAATTTTGGAGATCCGTTGTTGTTTCCGACTAGTAGTGCTCGAGATCCGTTTCTTCATCCTCATTTTTCTGCCTTCAATTTAGCTTCCGACGGCGGCGGTGAGGGTTTGGCGGCGGTGGACCAGCCGTCTAATTTACTTTCACATATGTTGCAGATCTCTCCGAGTTCCGGTGATGGTGTAATTAGTACTCCTCCATGTGAGTCGTTCGCCAAGGCGGTGGGGAATTCTCCGTGCTCGTCTTCAGCTTGCAGTGGCGGTGTCGTGCTTCCGACCGGTGGCTCGAATCCTTTTTGTTTAATGGAGAATTCTGGGATTCAGATCTCTTCCCCACGTAATTCCACCACTAAAAGAAGGAAGAGCCAAGTGAAGAAGGTGGTGTGCATTCCGGCACCGGGGCCGGCGAACAACCGATCAAGCAGCGGTGAAGTGGTTCCTTCTGATCTATGGGCATGGAGGAAGTACGGACAAAAGCCCATCAAAGGATCCCCATATCCAAGGGGATATTATAGGTGCAGTAGCTCAAAGGGCTGCTCCGCTCGAAAGCAGGTCGAGCGCAGTCGAACCAACCCCAACATGCTTGTCATCACCTACACCTCGGAGCACAACCACCCATGGCCCACTCAACGCAATGCTCTTGCAGGCTCAACACGCTCCCACCCTTCTCGAACCCCTACCACCCCCACCGCTCGTAAAACAAGCCCAAAACACGAGCGCACCAACAACAACCAACCAACCACAACACTAAAGGAGGAAGAGATGGATGCAGGCCAAACGACAGAAAAAGAAATAGCAGCAACAACAAACAATCATCAGGAAGATGGAGATCATCAGAATTTCCCTTATGACTTAATTTTCACTGAATTTGCTGACTATGACTACGACCACGACCATCATCATCTTTCAGCAGACCCTCTAAACAACAATATGTTGTTGTTTAGTAGCCATGGCTTTAGTACAGGAAATGGAGAAGGGAGTAAAGATCCATTTTTGGAGCTCTATGATTGGGCAGATAATTCAAATGGAAGTTTGTTCAAAGAAGCCAAGGGAGGTTGA 1230 49.11 MFCSLFEMDNNYQQAGDLTDVIRLSSAAVAGGLSAEFSLDPSSSDRRLWPHLTADESSMNFGDPLLFPTSSARDPFLHPHFSAFNLASDGGGEGLAAVDQPSNLLSHMLQISPSSGDGVISTPPCESFAKAVGNSPCSSSACSGGVVLPTGGSNPFCLMENSGIQISSPRNSTTKRRKSQVKKVVCIPAPGPANNRSSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTNPNMLVITYTSEHNHPWPTQRNALAGSTRSHPSRTPTTPTARKTSPKHERTNNNQPTTTLKEEEMDAGQTTEKEIAATTNNHQEDGDHQNFPYDLIFTEFADYDYDHDHHHLSADPLNNNMLLFSSHGFSTGNGEGSKDPFLELYDWADNSNGSLFKEAKGG 409
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 10260934 10264508 + CePI673135_03g008450.1 Cec03g0845 198469
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0845 409 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 329 IPR044810 GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)
Cec03g0845 409 MobiDBLite consensus disorder prediction 297 311 - -
Cec03g0845 409 Gene3D WRKY domain 177 258 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0845 409 ProSiteProfiles WRKY domain profile. 199 265 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0845 409 SMART WRKY_cls 204 264 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0845 409 FunFam probable WRKY transcription factor 14 177 258 - -
Cec03g0845 409 Pfam WRKY DNA -binding domain 206 263 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0845 409 SUPERFAMILY WRKY DNA-binding domain 202 265 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec03g0845 409 MobiDBLite consensus disorder prediction 259 316 - -
Cec03g0845 409 MobiDBLite consensus disorder prediction 259 289 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0664 Cec-Chr3:7170652 Cec03g0845 Cec-Chr3:10260934 3.80E-30 dispersed
Cec03g0845 Cec-Chr3:10260934 Cec04g2251 Cec-Chr4:40147310 9.40E-54 dispersed
Cec03g0845 Cec-Chr3:10260934 Cec01g0090 Cec-Chr1:744261 5.00E-31 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29221 PF03106 WRKY 4.20E-25 CL0274 Cec TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0845 - - - 0.0