Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0885 ATGGGTTCTTTGCCTTCCGAAGCTTTGGCCGTCGAAATTACCGACACCCATATTCACACCGTCGCCGGTGCCGGCGCAGAAACCTCTGAATGGCTTCTCAATTCCCCCAACCCTCCAACTTTGTGGGAAGAAATTGTGGACGCCATCAAAGGAAATGCCGTTCCTCGAAGTTGCACAAAGACCCCCAACAAAAACACTTCTTCTTCTTCTTCAAGCTCTGGAAAACCGAGCATTTTCAAAACCATACTTTCCCTTCTACAGAGAGTGTTCCCGATCCTTAAATTGCCTCGAAATTACAAAGCCTCCAAGTTCAAAAACGACCTCATGGCTGGTTTAACGCTCGCCAGTCTCAGCATCCCTCAGAGTATTGGGTATGCTAACTTGGCAAAGCTTGATCCTCAGTTCGGTCTCTATACAAGTGTTGTTCCTCCTTTGATTTATGCATTTATGGGGAGTTCGAGAGAGATAGCGATTGGACCAGTGGCTGTGGTTTCATTGCTTCTTTCGTCTATGCTTCAAGAAATTCAAGATCCTGTTGCAGACTCAGTTGCTTATAGAAGGCTTGTTTTCACTGTAACTTTATTTGCAGGGATTTTCCAAGCATCATTTGGACTCTTGAGACTGGGTTTTCTTGTGGACTTCCTATCTCATGCTGCCATTGTTGGGTTCATGGCTGGGGCTGCCATTCTCATTGGTCTTCAACAAATGAAAGGCTTACTTGCCATCAGCAACTTCACCACTAAAACTGATGTGGTTTCTGTTTTGGAGTCTGTGGTGAAATCTGTTCACCAGACTTGGTACCCTTTGAACATTGTACTTGGCTGCTCCTTCCTAATCTTTCTCCTTGTAGCCAGGTTCATAGGCAGAAGGAAGAAGAAGCTATTTTGGGTGTCAGCCATTGCTCCTCTCATATCAGTTATTGTCTCCACTTTGATAGTGTTTGTTTCAAGAGCTGACAAACATGGAGTTAAGATAGTGAAGGAAGTGAAAGAAGGACTGAACCCAATCTCCATTCATCAGCTTCAATTGAACAGCTCAACTGTTGGGTTAGCTGCAAAAGCTGGCCTCATTGCTGCCCTTATAGCTCTCACAGAAGCCATCGCGGTGGGCCGATCGTTCGCCTCGATTAAAGGCTACAGCATTGATGGGAACAAGGAGATGATAGCCATGGGATTGATGAACATAATAGGCTCTTTAACATCTTGTTACATAGCGACTGGGTCATTCTCAAGAACTGCTGTGAATTATAGTGCTGGGTGTGAAAGTGTATTGTCAAATATAGTGATGGCAATAACAGTGATGGTGACACTGCAATTTATGACTCGGTTTCTTTACTTTACTCCAATGGCCATTTTGGCTTCAATCATTCTCTCAGCTCTTCCTGGTCTCATTGACATTAATGAAGCTTTGCATATTTGGAAGGTTGATAAGCTTGACTTTCTTGCTTGTCTTGGCGCTTTCCTTGGTGTCTTGTTTCATTCGGTCGAATTTGGCCTTCTTGTAGCGGTTGGAATTTCATTTGCAAAGATATTGTTGATTTCAGTAAGACCAGCCACAGAAGAGGTGGGAAGGCTTCCAAGAAGTGAGATGTTTTGCAACATGAAGCAATTCCCCATGGCCACAAAAACTCAAGGACTCTCCATTATCAGAATTAACTCTGCCTTGCTTTGTTTTGCCAATGCTAGTTTCATTAGAGACAGGATAATGAGATTGGTGGAAGATGATGATGATGATGATATTGAAGAAAAAACAGCAAAAGATCAACCTAAACAAGTAGTTGTTGACATGTGCAATGTTTTGAATATCGATACATCAGGAATCATTGCTTTAGAGGAACTTCACAAAAGGTTGTTGTTGCACGGCATTCAAGTAACAATAGCCGGTCCAAAATGGGAAGTGATCCACAAACTAAAAAAAACAAACTTTGTTGAAAGAATTGAAGGAAGGGTTTTCCTATCAGTTGGTGAAGCTGTGGATTCCTGCCTTGGAAATGCTTCCAAATTGCCTTCTCCCTTACCAAAGTCATTGTGA 2031 42.84 MGSLPSEALAVEITDTHIHTVAGAGAETSEWLLNSPNPPTLWEEIVDAIKGNAVPRSCTKTPNKNTSSSSSSSGKPSIFKTILSLLQRVFPILKLPRNYKASKFKNDLMAGLTLASLSIPQSIGYANLAKLDPQFGLYTSVVPPLIYAFMGSSREIAIGPVAVVSLLLSSMLQEIQDPVADSVAYRRLVFTVTLFAGIFQASFGLLRLGFLVDFLSHAAIVGFMAGAAILIGLQQMKGLLAISNFTTKTDVVSVLESVVKSVHQTWYPLNIVLGCSFLIFLLVARFIGRRKKKLFWVSAIAPLISVIVSTLIVFVSRADKHGVKIVKEVKEGLNPISIHQLQLNSSTVGLAAKAGLIAALIALTEAIAVGRSFASIKGYSIDGNKEMIAMGLMNIIGSLTSCYIATGSFSRTAVNYSAGCESVLSNIVMAITVMVTLQFMTRFLYFTPMAILASIILSALPGLIDINEALHIWKVDKLDFLACLGAFLGVLFHSVEFGLLVAVGISFAKILLISVRPATEEVGRLPRSEMFCNMKQFPMATKTQGLSIIRINSALLCFANASFIRDRIMRLVEDDDDDDIEEKTAKDQPKQVVVDMCNVLNIDTSGIIALEELHKRLLLHGIQVTIAGPKWEVIHKLKKTNFVERIEGRVFLSVGEAVDSCLGNASKLPSPLPKSL 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11312720 11319147 - CePI673135_03g008850.1 Cec03g0885 198509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0885 676 ProSitePatterns SLC26A transporters signature. 133 154 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cec03g0885 676 Pfam Sulfate permease family 104 484 IPR011547 GO:0016020(InterPro)
Cec03g0885 676 NCBIfam sulfate permease 91 654 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cec03g0885 676 SUPERFAMILY SpoIIaa-like 543 661 IPR036513 -
Cec03g0885 676 MobiDBLite consensus disorder prediction 54 76 - -
Cec03g0885 676 ProSiteProfiles STAS domain profile. 556 661 IPR002645 -
Cec03g0885 676 CDD STAS_SulP_like_sulfate_transporter 537 652 - -
Cec03g0885 676 PANTHER SULFATE TRANSPORTER 80 662 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec03g0885 676 Pfam STAS domain 538 657 IPR002645 -
Cec03g0885 676 Gene3D STAS domain 516 663 IPR036513 -
Cec03g0885 676 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0885 Cec-Chr3:11312720 Cec09g1649 Cec-Chr9:29984451 2.70E-162 dispersed
Cec03g0885 Cec-Chr3:11312720 Cec03g0888 Cec-Chr3:11372604 1.00E-166 proximal
Cec07g1036 Cec-Chr7:25138568 Cec03g0885 Cec-Chr3:11312720 2.50E-221 transposed
Cec11g1587 Cec-Chr11:30181370 Cec03g0885 Cec-Chr3:11312720 5.80E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0885 K17469 - csv:101211892 1120.15