Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec03g0903 | ATGCCTCGGGTCACATATCCTGCTCGGAAACTGAGTCCGAGAACAAGTGACATGGCCGGTGGAGAAGAACAGCAGGGTGAATGCTGGGGTGGCTCCACTGGGGCATCGGGTTTTGACTTGGGCAACAAAAGTTTTGGCATTGCAGATGTACGTTCGACGTCGATTGTAATTGTACAGGTTTTTATTAGCTTCAACGCTTGCCAGGAACAAGATGAGGCCCAGGCCTCTGCTGGCTACGACGGTTTCCGAGCTCTGCCTCTGCATACGAAGCCCCAAGCCGCGATGGGCTCCATAGACGTCCAATCAAACAACGCTGAAAATGGATCCGCCGCCGCCTCTGCTGATGGTCGTCAAAAGCCAGTTCCCGCCGACGGTTTGAACCAGACATCTAACGAGCCAGACGGAACGGCGCCTGAGAAGCCTAAGGAATTGGGGCCGACGAAGAAGCGTATGTCCTCCATGCTTCCTCTAGATGTCGGCACCCGCGTCATGTGCCGCTGGAGGGACGGGAAGTACCATCCCGTTAAGGTCATCGAGCGTCGGAAGTTGCAGGCAACTGGTTTTAGTGACTACGAATACTATGTCCATTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGATTCAGTTGAGACGGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGGTTGAAGATGACCCGACACCAGAAGCGGAAGATTGATGAAACCCATGTTGAGGGTCATGAGGAACTTGATGCTGCCAGCTTGAGGGAGCATGAAGAATTTACGAAAGTGAAAAATATTGCAACAATTGAACTTGGAAGATACGAGATTGAGACATGGTATTTCTCCCCCTTTCCACCAGAGTACAATGACACTACAAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTCCAGAGACATATGAGGAAGTGTGATCTGAAGCATCCTCCTGGTGATGAAATTTATCGATGTGGTACTTTATCAATGTTTGAGGTTGATGGAAAAAAGAACAAGGTTTATGGGCAGAATCTCTGTTACCTAGCAAAGTTATTTCTGGACCACAAGACTCTCTACTATGATGTTGACCTTTTTCTGTTTTATGTCCTGTGCGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTATGGCAAGTTCTTAATAGCTTTTTCGTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGCACTCCTGAAAGACCTCTTTCAGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGAGTTCTTTTAGACATCTTGAAAAAGCACAAGGCCAATATCTCTATCAAGGAGCTAAGTGACATGACAGCTATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGGCAGCATGTTATATGTGCTGACCCGAAGGTGCTGGATCGTCATCTCAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAGGGTACTGCTTGTGAAGGATATTAA | 1647 | 46.93 | MPRVTYPARKLSPRTSDMAGGEEQQGECWGGSTGASGFDLGNKSFGIADVRSTSIVIVQVFISFNACQEQDEAQASAGYDGFRALPLHTKPQAAMGSIDVQSNNAENGSAAASADGRQKPVPADGLNQTSNEPDGTAPEKPKELGPTKKRMSSMLPLDVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLDSVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRCGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKANISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQGTACEGY | 548 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 11831801 | 11842370 | - | CePI673135_03g009030.1 | Cec03g0903 | 198527 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec03g0903 | 548 | Pfam | MYST family zinc finger domain | 268 | 322 | IPR040706 | - | |
| Cec03g0903 | 548 | Gene3D | - | 147 | 266 | - | - | |
| Cec03g0903 | 548 | Gene3D | - | 445 | 525 | IPR036388 | - | |
| Cec03g0903 | 548 | FunFam | Histone acetyltransferase | 325 | 452 | - | - | |
| Cec03g0903 | 548 | Pfam | MOZ/SAS family | 327 | 504 | IPR002717 | GO:0004402(InterPro)|GO:0006355(InterPro) | |
| Cec03g0903 | 548 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 267 | 538 | IPR016181 | - | |
| Cec03g0903 | 548 | FunFam | Histone acetyltransferase | 147 | 266 | - | - | |
| Cec03g0903 | 548 | PANTHER | HISTONE ACETYLTRANSFERASE | 127 | 541 | IPR050603 | GO:0000790(PANTHER)|GO:0003712(PANTHER)|GO:0045892(PANTHER)|GO:0045944(PANTHER) | |
| Cec03g0903 | 548 | MobiDBLite | consensus disorder prediction | 105 | 151 | - | - | |
| Cec03g0903 | 548 | Gene3D | - | 325 | 537 | - | - | |
| Cec03g0903 | 548 | FunFam | Histone acetyltransferase | 265 | 322 | - | - | |
| Cec03g0903 | 548 | Pfam | RNA binding activity-knot of a chromodomain | 157 | 215 | IPR025995 | - | |
| Cec03g0903 | 548 | CDD | NAT_SF | 378 | 436 | - | - | |
| Cec03g0903 | 548 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 266 | 537 | IPR002717 | GO:0004402(InterPro)|GO:0006355(InterPro) | |
| Cec03g0903 | 548 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Cec03g0903 | 548 | Gene3D | - | 267 | 323 | - | - | |
| Cec03g0903 | 548 | FunFam | Histone acetyltransferase | 445 | 524 | - | - | |
| Cec03g0903 | 548 | SMART | chromo_7 | 171 | 230 | IPR000953 | - | |
| Cec03g0903 | 548 | SUPERFAMILY | Chromo domain-like | 148 | 267 | IPR016197 | - | |
| Cec03g0903 | 548 | CDD | CBD_MOF_like | 160 | 229 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec03g0903 | K11308 | - | csv:101217824 | 896.345 |