Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0914 ATGAATCGTCTGCCTCAGTTTTTTTCTCCTAGGAAGAAAGGAAAACCCATGGATCCGAGGAAAATCGCTGGGAAACCCAAGCTTGGCCGACTTAATGCGGCCAAGAACATTGACTATGATGCTACTTCCTCATCTTCTTCGCTTGAAGATTCTTCTGGGTCTCTCTATACTCGCTCCATGGAGACCCCCGATCCCTCCAGTTTTCGGATTAAAGGGCTTGACGGTGAAGTTGATCTCATATGTCGGACTTTAGGGCTAGATGGCCCTGACGACTTTGCTATTCCGATGGAGGCATGGGAGGCTAGAAAGGTTCGTTCATCTTCCGAGCTTCTACCGAGGTCGAGGCTGTATCCCATGGACACCTCCCCGAAGACCGAGGAGATTAGTAAGGATAAGGAAGATAAAGAAATCGAAGATGAATTGTGCCGGAGGGTTAAGGATTCAGTTCGAATTAGCGTCGAGCTGTCCACGCCTAAGTCGGAATTTCCAGAGTTGAATGAACGCCGGATGGCTACTGCTACTGGATGTAGTTCGAGAAGTGGAATCAATGGTGCTCGGCCTCCTTTACTCAAGCCACCGCCGTCGATGAGGCTTCCAAATTTGGATAATACTTGCTCCACTTGGGACATTTTGAAAGCTTTTGCTCCATTAGTTGACGATGAACATCAGGAGGAAGTAGGAGAACGAGTGGAACCATTAGTTGAAGGAGAAGGAGAGGGAAATATTGTGAGGCCCGTGATGCGCATAGGGTCTTGGGGTTCCTTCACGACCTCGAATGACGATGATTCTTCGAGCAGTACTACGGAGCCTGCAAATATTTCACCCAATATGAGAGGTTGTCCCATTATCACATCCTGGGTGGTCGGCAGGCTTCTTGGACGTGGTTCATATGGATCAGTATACGAAGCAATTTCAGAGGATGGTACGTTCTTTGCACTGAAAGAAGTTTCACTTCTCGAGGATGATATTCAGGGAAGACAAAGTGTCGATCAACTTCAGCAGGAGATAGCTCTTCTAAGTGAGTTTGAGCATGAGAACATAGTTCAGTACTACGGCACGCATTCGGATGGGTCAAAACTCTATATCTTCCTCGAGCTTGTATCTCAGGGCTCCCTTATGAGTCTATATCAAAGGACAATCCTTATGGACTCCATTGTTTCTGCCTACACAAGGCAGATTCTGTCTGGTTTAAAGTATCTTCATGAGCGAAATGTGGTTCACAGGGATATTAAATGTGCTAATATATTGGTGGATAAAAATGGATCTGTGAAGCTCGCAGATTTTGGTTTGGCGAAGGCAACAAAATTGAACGACGTTAAATCTTGTAAGGGAACTGCGTATTGGATGGCACCTGAGGTGGTTAATAGGAAGGGTCAAGGATATGGTCTTCCGGCCGATATCTGGAGCCTTGGGTGCACAGTATTGGAAATGTTAACTCGAAAGCTTCCATATTCAGAACTCGAATCTCATATGCAAGCACTATATAAGATTGGAAAAGGCAAACCGCCTGCAGTTCCCGAGTCTCTCCCAAAAGATGCACAGGATTTCATTCGGCAGTGCCTACAAGTTAATCCAAAGGACCGTCCTACTGCTGCTGATCTATTAAATCACTCGTTTGTGAAAAGACCAGTTTCCAGTTTATCAGGGTCGGCATCTCCTTACAACAGGCCAGGCAGAAGGATTTAA 1686 46.09 MNRLPQFFSPRKKGKPMDPRKIAGKPKLGRLNAAKNIDYDATSSSSSLEDSSGSLYTRSMETPDPSSFRIKGLDGEVDLICRTLGLDGPDDFAIPMEAWEARKVRSSSELLPRSRLYPMDTSPKTEEISKDKEDKEIEDELCRRVKDSVRISVELSTPKSEFPELNERRMATATGCSSRSGINGARPPLLKPPPSMRLPNLDNTCSTWDILKAFAPLVDDEHQEEVGERVEPLVEGEGEGNIVRPVMRIGSWGSFTTSNDDDSSSSTTEPANISPNMRGCPIITSWVVGRLLGRGSYGSVYEAISEDGTFFALKEVSLLEDDIQGRQSVDQLQQEIALLSEFEHENIVQYYGTHSDGSKLYIFLELVSQGSLMSLYQRTILMDSIVSAYTRQILSGLKYLHERNVVHRDIKCANILVDKNGSVKLADFGLAKATKLNDVKSCKGTAYWMAPEVVNRKGQGYGLPADIWSLGCTVLEMLTRKLPYSELESHMQALYKIGKGKPPAVPESLPKDAQDFIRQCLQVNPKDRPTAADLLNHSFVKRPVSSLSGSASPYNRPGRRI 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12074021 12079166 + CePI673135_03g009140.1 Cec03g0914 198538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0914 561 Gene3D Transferase(Phosphotransferase) domain 1 284 554 - -
Cec03g0914 561 SMART serkin_6 286 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0914 561 MobiDBLite consensus disorder prediction 1 69 - -
Cec03g0914 561 MobiDBLite consensus disorder prediction 37 64 - -
Cec03g0914 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0914 561 PRINTS Tyrosine kinase catalytic domain signature 465 487 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0914 561 PRINTS Tyrosine kinase catalytic domain signature 364 377 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0914 561 PRINTS Tyrosine kinase catalytic domain signature 399 417 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0914 561 PRINTS Tyrosine kinase catalytic domain signature 509 531 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g0914 561 MobiDBLite consensus disorder prediction 173 196 - -
Cec03g0914 561 MobiDBLite consensus disorder prediction 253 274 - -
Cec03g0914 561 ProSiteProfiles Protein kinase domain profile. 286 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0914 561 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524(InterPro)
Cec03g0914 561 SUPERFAMILY Protein kinase-like (PK-like) 284 543 IPR011009 -
Cec03g0914 561 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 119 542 IPR050538 -
Cec03g0914 561 FunFam Mitogen-activated protein kinase 1, putative, expressed 284 552 - -
Cec03g0914 561 Pfam Protein kinase domain 287 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0914 Cec-Chr3:12074021 Cec04g1224 Cec-Chr4:31766434 7.10E-60 dispersed
Cec03g0914 Cec-Chr3:12074021 Cec05g0983 Cec-Chr5:8598472 1.10E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71846 PF00069 Pkinase 2.00E-70 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0914 K13414 - csv:101218538 1002.28