Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g0980 ATGCACTCTTCCTCTTCTCTCACATTAGCCACCACGGAGCCAGTCGACGGCCCCACCAACTGCCCTCGCGTGCCGGTCGTTGCCGCCGGCAGAGAAGCGGTTTTTTCTCTCAGTTTCTCCTCTTCTCATCGCGTCGCCGGCCGTTTGCAGCACTGTTCACTGCCGTTCGGTCACTGTCGTGTCCCTACATCGACGTGGCACATTAGCGTTCATTATCATCCTGAAAAGCTTGATGGTATTATTGAGTCATTTTTTATGCTTCTCGCCGTCTTTACTGGAACTGGAAAGGCATTCTTGCTGAAATCTTTTATGAATATGATTGAAAAGGAATTTTTTACTGAATATGGTGAAGCTACTCAATATGAAATTGAAGAAGTTATAGGTAGAGGGAGCTATGGAGTTGTTGCGTCTGCCATAGACACTCATTCTGGTGAAAAAGTTGCCATCAAGAAGATAAATAATGTCTTTGAGCATGTTTCTGATGCCACACGGATTCTAAGAGAAATTAAGCTCCTTCGGTTTCTTCGGCATCCTGATATTGTTGACATAAAACATATAATGCTCCCTCCATCCAGGAGGGAGTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTGTGATCTTCATCATGTACTCAAGACTAATGACGATCTCACTCCTCAGCATCATCAGTTTTTCTTGTATCAACTTCTTAGAGCCTTGAAGTATATACATTCAGCTCATGTGTTCCATAGGGATTTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAGCTGAAGATCTGTGACTTTGGACTTGCGCGTGCATCTTTCAGTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTTGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCATTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATATTTGCTGAAATGCTGTCAAGCAAGCCTTTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATAACTGACTTACTCGGTACTCCTTCAGCTGAATGTATTGCTAAGATTCGTAATGAGAAGGCCAAAAGGTATTTGAGTGGTATGAGAAAAAAGAATCCTATACCTCTTTCAAGAAAGTTCCCTGATGCAGATCCACTAGCTCTTCGTTTACTTGAACGTCTTCTTGCATTTGATCCTGAGGACCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCTTATTTCCATGGACTGGCAAATCTGAAGGATGAACCATCCAGGCAACCCATTTCAAAACTTGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGATGTCAGAGAGCTTATTTATAGAGAAATTTTAGAGTATCACCCTCAAATGCTACAAGAGTACCTTCAAGGTTCTGGGAGTCACTTTCTGTATCCTAGTGGAATTGATCGATTCAAGCGACAATTTGATCATCTTGAGGAACGTTCTGGTAAAGGTGAGAGAGGCAGTCCACTTTTAAGGAAGCATGCCTCCTTGCCTAGGGAGCGAATATATTCACCAAGAGATGAAGATGATGATGATGAAAAATGTAAAATAGAACAGCGAAATGCAGCTTCGGCTGAACGTGCAGCGCTTCAAAGCCCTCCTGGACCTGCTTATCCATTAACTGCTGGAAACGGTTCTGTTCAAGTTGCGAGGAAGGAAAGAATACAACATTGCTCGCCTTCCTCAGATTCTTAA 1725 42.84 MHSSSSLTLATTEPVDGPTNCPRVPVVAAGREAVFSLSFSSSHRVAGRLQHCSLPFGHCRVPTSTWHISVHYHPEKLDGIIESFFMLLAVFTGTGKAFLLKSFMNMIEKEFFTEYGEATQYEIEEVIGRGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREIKLLRFLRHPDIVDIKHIMLPPSRREFKDLYIVFELMECDLHHVLKTNDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFSDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSSKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLSGMRKKNPIPLSRKFPDADPLALRLLERLLAFDPEDRPSAEEALADPYFHGLANLKDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGSGSHFLYPSGIDRFKRQFDHLEERSGKGERGSPLLRKHASLPRERIYSPRDEDDDDEKCKIEQRNAASAERAALQSPPGPAYPLTAGNGSVQVARKERIQHCSPSSDS 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17152601 17159208 + CePI673135_03g009800.1 Cec03g0980 198604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g0980 574 SUPERFAMILY Protein kinase-like (PK-like) 118 417 IPR011009 -
Cec03g0980 574 SMART serkin_6 121 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0980 574 MobiDBLite consensus disorder prediction 489 574 - -
Cec03g0980 574 Gene3D Transferase(Phosphotransferase) domain 1 207 435 - -
Cec03g0980 574 Gene3D Phosphorylase Kinase; domain 1 137 458 - -
Cec03g0980 574 FunFam Mitogen-activated protein kinase 436 458 - -
Cec03g0980 574 FunFam Mitogen-activated protein kinase 108 213 - -
Cec03g0980 574 ProSiteProfiles Protein kinase domain profile. 121 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0980 574 ProSitePatterns Protein kinases ATP-binding region signature. 127 151 IPR017441 GO:0005524(InterPro)
Cec03g0980 574 FunFam Mitogen-activated protein kinase 207 435 - -
Cec03g0980 574 ProSitePatterns MAP kinase signature. 156 259 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0980 574 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 118 453 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec03g0980 574 MobiDBLite consensus disorder prediction 489 531 - -
Cec03g0980 574 Pfam Protein kinase domain 121 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g0980 574 CDD STKc_TDY_MAPK 120 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1613 Cec-Chr1:30787732 Cec03g0980 Cec-Chr3:17152601 6.30E-186 dispersed
Cec03g0980 Cec-Chr3:17152601 Cec07g0713 Cec-Chr7:13395452 2.10E-253 dispersed
Cec03g0980 Cec-Chr3:17152601 Cec06g1641 Cec-Chr6:30022023 7.90E-208 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71848 PF00069 Pkinase 2.80E-67 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g0980 - - - 0.0