Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1062 ATGGGATCCTGCTTGTCTGCAGGAAGTAAGGAGGCCATTACTGGTTCCTCTGTATCTCCTGTGTTGGGAGCAAGTAAACAGAAAGACTCAGACAATGTGTTTGAGGAGCAGAATCAGGGTGAAGCGACAGTACACAGAATTCCTGGTAGGATGTTCTTGAATGGGTCCAGTGAAGTTGCTTCACTTCATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGAATTTTGGCTCCAGAACAGATACATTCTTTTGTGGAGTTTTTGATGGCCATGGTCCTTATGGTCATCTGGTCGCAAAAAGAGTGAGGGATTCTCTTCCCCTGAAACTGACTGCACATTGGGAGGCTAATGAAGACATTTCAGAAGAGTTAGGTTGTAAAACAGAAGCTGTTAACAATGAAGATTCTACCTTAGAAATTAGTTGGAAGGAAGCTAGTTCTCCCCTTACGCAGCCAGAAATTTCTGAAAAACTGAAGGAATCATTTCTGAAGGCTTTTCAGATAATGGATGGAGAACTCAAAATTCAACCAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGGTCGAGATCTTGTTATTGGAAACGTCGGGGACTCTCGGGCTGTGCTGGGTACCAGAGATGAGGATAATTCTCTCCAAGCGGTTCAATTGACCATAGATCTCAAGCCAGATATTCCAGGGGAAGCTGAGAGAATTCTCAAATGCAAAGGTCGGGTATTTGCTCATCAGGATGAACCAGAAGTTGCTAGAGTATGGCTTCCAAACAATGATTCCCTCGGGCTGGCGATGGCTCGATCTTTTGGAGACTTTTGCCTCAAGGATTTTGGTCTAATTTCTGTTCCTGAAATATCATATCGTTTTCTGTCTGACAAGGACGAGTTTATAGTTTTAGCTACAGACGGAATTTGGGATGTTCTTTCAAACAAAGAGGTAGTTGACATTGTAGCATCAGCCCCAGCTCGTTGTGCAGCCCGGTCATTGGTTGAGTCTGCAACTGAAGCATGGAGATGCAAGCTTCCTTCTTCCAACATTGATGACTGTGCCGTTGTCTGTCTCTTCCTCGACTCGAACTTGAACGTTATGGCATCAGAGACAAATATTAAATACAAGGAGGTTAAATCAGCAATCCAAGCTGAGATGGCCACAGTAGAAGATGTCTCTGGGGAGGACTAA 1212 44.14 MGSCLSAGSKEAITGSSVSPVLGASKQKDSDNVFEEQNQGEATVHRIPGRMFLNGSSEVASLHTQQGKKGMNQDAMIVWENFGSRTDTFFCGVFDGHGPYGHLVAKRVRDSLPLKLTAHWEANEDISEELGCKTEAVNNEDSTLEISWKEASSPLTQPEISEKLKESFLKAFQIMDGELKIQPSIDCFCSGTTAVALVKQGRDLVIGNVGDSRAVLGTRDEDNSLQAVQLTIDLKPDIPGEAERILKCKGRVFAHQDEPEVARVWLPNNDSLGLAMARSFGDFCLKDFGLISVPEISYRFLSDKDEFIVLATDGIWDVLSNKEVVDIVASAPARCAARSLVESATEAWRCKLPSSNIDDCAVVCLFLDSNLNVMASETNIKYKEVKSAIQAEMATVEDVSGED 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21930953 21933602 + CePI673135_03g010620.1 Cec03g1062 198686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1062 403 ProSiteProfiles PPM-type phosphatase domain profile. 59 367 IPR001932 -
Cec03g1062 403 SMART PP2C_4 48 365 IPR001932 -
Cec03g1062 403 CDD PP2Cc 59 367 IPR001932 -
Cec03g1062 403 SUPERFAMILY PP2C-like 57 368 IPR036457 -
Cec03g1062 403 Gene3D - 55 373 IPR036457 -
Cec03g1062 403 PANTHER PROTEIN PHOSPHATASE 43 366 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec03g1062 403 Pfam Protein phosphatase 2C 152 331 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1062 Cec-Chr3:21930953 Cec11g0982 Cec-Chr11:16328819 7.40E-144 dispersed
Cec03g1062 Cec-Chr3:21930953 Cec02g1820 Cec-Chr2:36009078 8.60E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1062 - - - 0.0