Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1081 ATGAAGCTCCAAGTCGCCGACGACCATCTCGACGCCCTTCTTCTTCCTCCTCCTAACTTCTCCATGGTTGAGGACGGCATTTTCCGATCCGGCTTCCCTCAGCCCCTCAATTTCCCCTTCCTCCGCACCCTCAATCTCCGCTCCATCATATATTTGTGTCCTGAACCCTACCCAGAGGAGAATTTGGAGTTTCTTAAAGCTAATAATATCAAGCTTTTTCAATTCAAAATTGAAGGCAAAAAGGAGCCTTTCGTTTCGATTCCAGAGGATGCTATTCTTGAGGCTCTAAAAATCCTGATTGATGTTAGGAATCACCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTCGTTGGTTGCCTGAGGAAGTTTCAGAACTGGTGCTTGAGTTCGGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAATCGAGGGTGACGGATCTACAATTCATCGAGAAATTCGACATTGGGTCTCTGAGGCAATGTGTTTACAGCATCATATATCAGTATCAAGGTTATAGCTCAAACAAGAGGAGGCTGTTGTATAGAGAAGAAAACTTGCAAAAGCCTCAAACAACATCAGTTTAG 603 45.61 MKLQVADDHLDALLLPPPNFSMVEDGIFRSGFPQPLNFPFLRTLNLRSIIYLCPEPYPEENLEFLKANNIKLFQFKIEGKKEPFVSIPEDAILEALKILIDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLSSVFEEYQRFAGMKSRVTDLQFIEKFDIGSLRQCVYSIIYQYQGYSSNKRRLLYREENLQKPQTTSV 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 22447885 22449569 - CePI673135_03g010810.1 Cec03g1081 198705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1081 200 Pfam Tyrosine phosphatase family 14 162 IPR004861 -
Cec03g1081 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 159 IPR029021 -
Cec03g1081 200 FunFam probable tyrosine-protein phosphatase At1g05000 13 163 - -
Cec03g1081 200 Gene3D Protein tyrosine phosphatase superfamily 13 163 IPR029021 -
Cec03g1081 200 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791(InterPro)
Cec03g1081 200 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791(InterPro)
Cec03g1081 200 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791(InterPro)
Cec03g1081 200 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791(InterPro)
Cec03g1081 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 13 191 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Cec03g1081 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 170 IPR020422 GO:0006470(InterPro)
Cec03g1081 200 CDD PFA-DSP_Siw14 13 160 - -
Cec03g1081 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 109 119 IPR016130 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1081 Cec-Chr3:22447885 Cec09g1099 Cec-Chr9:10827108 3.80E-56 dispersed
Cec03g1081 Cec-Chr3:22447885 Cec02g1896 Cec-Chr2:36733456 7.10E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1081 K18045 - csv:101211082 367.466