Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1110 ATGGCCGCGATTAGACCCAAACGGCGGAATCACTTGTCCATCTCCATCCTACTTCTTTTCTCACTCTCCGCCCTTCTCTCTGTTTCTTCCGGCCGCGAAACCTCCTCCTTCATCAACCACCGCAAGATAGCCGCCGTTGGAACTTCGTCTTCTTCCACTTCGAACTCCAGCTACGCTGTGATTTTCGACGCCGGAAGCTCCGGCAGCCGCGTCCACGTCTTTCACTTCGATCGGAATCTGGATTTGCTCTTCATCGGTTCAGAGATTGAGGTTTTCTCACAGATAAAGCCAGGGTTGAGTTCATACGCGGATGATCCTAAGAAAGCCGCGGATTCTCTAATTCCTTTAGTGGAGAAAGCAGAAAATGCGGTTCCTCAGAAAGTGCAATCCGTGACGCCGATTCGCCTAGGGGCGACGGCAGGGCTTAGGTTTCTGGAAGGGGGCAGATCTGAGAGGATTTTGGAAGCGGTAAGGGTTGTTCTGAAAACCACGAGCAGATTCAAGTATGAACAGAATTCGGTTTCCATTTTAGATGGAAATCAAGAAGGCTCTTATCAATGGTTGACAATAAACTATTTGCTAGAGAATTTGGGGAAGAAATACTCAAAAACAGTGGGAGTTATTGATCTTGGAGGTGGGTCTGTTCAAATGGCATATGCAATTTCTGATGAAGATGCAGCAAAGGCACCCATTGCTTCAGATGGAAACACCAAATTTGTTCAAAATTTCTACCTCAAGGGTTCAAATTATAACCTCTATGTTCACAGTTATTTGCGTTACGGTTTACAAGCTGCCCGAGTAGAGATCTTGAAGGTGACCAAAGACCTTGGCAACCCTTGCATTTTAGCTGCCTATCAAGGTACATACACATACGGTGGGGAGGAGTACAAAGTGTCAGCCCCAGAGTCAGGGTCGAGCTTCGCCAGTTGCCGGAAGGTAATTCTCGAGGCTTTGAAAATCAACAAATCATGTGGCTACAATGAATGCACTTTTGATGGTATATGGAGTGGCGGCGGAGGGGCCGGCCTCAACAATCTCTATGTTGCTTCTTTTTTCTTTGACAAGGCAGCTCAGGCTGGTTTCATAGATTCCAACAAACAAGATGCCATAGTGAAGCCCTTTGATTTCAAGAGAGCAGCAAGGATTGCCTGTCAAACTAAGTTTGTTGATGCAAGGGCTAAATATCCTAATGTTTACTCAAGTGACTTGCAATTTGTGTGTTTGGATCTTGTTTACGAGTACGCCCTACTTGTCGATGGATTCGGTATTGATTCTAGAAAAAAGATCACATTGGTGAAGCAAGTGGCATATCATGGTTCTCTTGCAGAGGCAGCATGGCCATTGGGCAATGCTGTAGCAATCCTCTCATCATCAAAGTACTCAACTGCAAATTATTATTGA 1401 45.68 MAAIRPKRRNHLSISILLLFSLSALLSVSSGRETSSFINHRKIAAVGTSSSSTSNSSYAVIFDAGSSGSRVHVFHFDRNLDLLFIGSEIEVFSQIKPGLSSYADDPKKAADSLIPLVEKAENAVPQKVQSVTPIRLGATAGLRFLEGGRSERILEAVRVVLKTTSRFKYEQNSVSILDGNQEGSYQWLTINYLLENLGKKYSKTVGVIDLGGGSVQMAYAISDEDAAKAPIASDGNTKFVQNFYLKGSNYNLYVHSYLRYGLQAARVEILKVTKDLGNPCILAAYQGTYTYGGEEYKVSAPESGSSFASCRKVILEALKINKSCGYNECTFDGIWSGGGGAGLNNLYVASFFFDKAAQAGFIDSNKQDAIVKPFDFKRAARIACQTKFVDARAKYPNVYSSDLQFVCLDLVYEYALLVDGFGIDSRKKITLVKQVAYHGSLAEAAWPLGNAVAILSSSKYSTANYY 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23361949 23376144 + CePI673135_03g011100.1 Cec03g1110 198734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1110 466 FunFam Apyrase 1 178 436 - -
Cec03g1110 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 177 192 IPR000407 GO:0016787(InterPro)
Cec03g1110 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 52 460 IPR000407 GO:0016787(InterPro)
Cec03g1110 466 Gene3D - 58 451 - -
Cec03g1110 466 Gene3D Exopolyphosphatase. Domain 2 178 436 - -
Cec03g1110 466 CDD NBD_sugar-kinase_HSP70_actin 60 219 - -
Cec03g1110 466 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 9 456 IPR000407 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1110 Cec-Chr3:23361949 Cec04g0717 Cec-Chr4:26319194 1.20E-142 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1110 K14641 - mdm:103428652 503.827