Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1216 ATGACCAATCTCCCTCCAGCCTTCTTCCTCTCTGCAGTTCAAAACCTCTTTCTCAACGTAACAATGGAGCATTTCTTAATCTCTCTCTTAATCCTCTTCCTCTTTTTCCTCTCTCTCACTTTCTTCATCCTCTTCCACAAGCACAAATCCTTGTTCTCCTATCCCAACGTTCCTCCCGGCGCCATAGGCTTTCCCATTCTCGGTGAGAGCCTCGAGTTCTTGTCCACTGGCTGGAAAGGCCACCCTGAGAAGTTCATCTTCGACCGTTTGAATAAGTACAAGTCTGATGTCTTCAAAACCTCCATCGTCGGCGTTCCGGCCGCCATTTTCTGCGGCCCTGCCTGCAACAAGTTCCTCTTCTCTAACGAGAATAAACTCGTTACTTCTTGGTGGCCGGATTCCGTTAACAAGATCTTTCCCTCTTCCACTCAGACTAACTCCAAAGAGGAAGCTAAGAAACTCAAGAAATTCCTCCCGCAATTCCTTAAGCCGGAAGCGCTTCAGCGTTATATTGGAATTATGGATGAACTCGCTCAACGCCATTTCGCTTCCTTCTGGGAGAACAGGGAAGAGGTCCTCGTGTTTCCTCTCGCTAAAAGGTTCACATTCTCGCTGGCGTGCCGATTGTTCGTGAGCGTAGACGATGAAATCCAGGTGGAGAGATTATCGAGACCGTTTGAGCACATTGTGGCAGGAATCATATCGTTGCCGATCGATTTACCAGGAACGCCGTTCAATCGAGCAATAAAGGCATCGAATTTCATCAGAAAGGAACTGGTGGCGATCGTGAGGCAGAGGAAATGGGATCTGGCGGAAGGAAAGGCGTCGCCGACGCAGGACATTCTGTCTCACATGCTTCTCACGTGCGATGAGAACGGATTTTACATGAACGAGTCCGATATCGCCGATAAGATTCTGGGGCTGTTGATCGGCGGCCATGACACTACCAGTGTCGCATGCACCTTCATCCTTAAGTTCCTTGCTGAGCTTCCTCATGTGTACGATGGCGTCTACGCGGAGCAAATGGAAATAGCAAAAGCAAAAGCCCAAGGGGAAGCATTGGAGTGGGAAGACATAAACAAGATGAAATATTCATGGAATGTGGCCTGTGAGGTTCTAAGAATTGCTTCCCCAGTCCAAGGTGCCTTTAGGGAAGTCTTAAACGACTTCGTTTTTAATGGCTTCTACATTCCCAAGGGCTGGAAGCTATATTGGAGTGCAAATGGAACACACAAAAACCCAGAGTACTTCCCAGAGCCGTACAAGTTTGAGCCAGCAAGATTTGAAGGGAATGGGCCATTGCCCTACACTTACGTGCCTTTTGGGGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCAAAGCTTGAGATTTTGGTGTTCATGCATAATTTGGTCAAGAGATTCAAATGGGCAAAGCTACTTGAAAAGGAGAATATCATTGTTGACCCATTGCCAATCCCTCAAAAAGGTCTCCCCGTTCGCCTTTTTCCTCGTCAACCTCTCTCTCTTTAG 1515 47.92 MTNLPPAFFLSAVQNLFLNVTMEHFLISLLILFLFFLSLTFFILFHKHKSLFSYPNVPPGAIGFPILGESLEFLSTGWKGHPEKFIFDRLNKYKSDVFKTSIVGVPAAIFCGPACNKFLFSNENKLVTSWWPDSVNKIFPSSTQTNSKEEAKKLKKFLPQFLKPEALQRYIGIMDELAQRHFASFWENREEVLVFPLAKRFTFSLACRLFVSVDDEIQVERLSRPFEHIVAGIISLPIDLPGTPFNRAIKASNFIRKELVAIVRQRKWDLAEGKASPTQDILSHMLLTCDENGFYMNESDIADKILGLLIGGHDTTSVACTFILKFLAELPHVYDGVYAEQMEIAKAKAQGEALEWEDINKMKYSWNVACEVLRIASPVQGAFREVLNDFVFNGFYIPKGWKLYWSANGTHKNPEYFPEPYKFEPARFEGNGPLPYTYVPFGGGPRMCPGKEYAKLEILVFMHNLVKRFKWAKLLEKENIIVDPLPIPQKGLPVRLFPRQPLSL 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27057229 27065466 - CePI673135_03g012160.1 Cec03g1216 198840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1216 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cec03g1216 504 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 PANTHER CYTOCHROME P450 26 56 476 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cec03g1216 504 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 CDD CYP90-like 89 498 - -
Cec03g1216 504 SUPERFAMILY Cytochrome P450 51 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 Pfam Cytochrome P450 58 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec03g1216 504 FunFam Taxadiene 5-alpha hydroxylase 48 499 - -
Cec03g1216 504 Gene3D Cytochrome P450 48 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1216 Cec-Chr3:27057229 Cec06g1613 Cec-Chr6:29701942 1.80E-187 dispersed
Cec03g1216 Cec-Chr3:27057229 Cec08g1645 Cec-Chr8:27794123 1.20E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1216 K20667 - csv:101206033 862.833