Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1235 ATGGATCAGACGGCTCCTAAGTGTGGTAGGGATGTTTCTAATGGTGAATTTCATCTTCTGTTCTCTGTAGGTTGCAAGAAATCTGGGAAGTCCAGAATCATGTTTCTAGCTGTTGGTCAGTTCTTAGTCAACACTGTTGAATGCACCATGGGTGTTTCTGGAAAATGGTTCAAAGCGTTAGTTGGTTCAAAAAAGTCAGAAAAATCTCAGTCATCAGAACATGATGAAAATGCGAGGACAGTCACCAACAAGTTTTGGCATCGGAGAAAGCATTCTGTTGATATTGATGCTGATAAACTTCAGCATGAGTTTAATTCAAATTTTACCCCATTTGTTGAAGAGTCCAATGCTCTTTCAGAACCAGAAGCTGTTTCTATTCCTTCTGATTCACTTCAAACTTATGATGCATTGCATAGTCAACAAAATGATATAGAAGAACAGGCTGCTATACGCATCCAAACAATGTTTCGAGGATTTCTGGCCAGAAGAGCTCTCCGAGCTCTCAAGGGATTAGTTAGACTTCAAGCTCTTGTCAGGGGTCACGCTGTCAGAAAACAAGCTGCAATAACTCTACGCTGTATGCAAGCTTTAGTGAGAGTCCAGGCTCGTGTTCGAGCAAGGCGTGTACGTATTGCATTGGAAAGTGAAACTGCACAACAAAAACTTCAACAAGAACTTGAAAACCAGGCTCGAGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTTGGATCTGTTGAAGACATTCAAGCAAAATTAATAAAAAGGCAGGAGGCTGCAGCTAAGCGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCAAGACAGCAGGCTGCCCTCTCTCAGTTTGAACCAGATAAAAGCAGCTGGGGTTGGAACTGGTTGGAAAGGTGGATGGCTGTTCGTCCATGGGAAAACCGCTTTCTTGACATCAATCTGAGAGATGGAGTGATGATTCGTGAGAATGGATTATCTGAGGGCAAAAGTAACACTAAATCTCATTTAAAGACTACTGCCAAGAAGACAAACTTAGTAACTGATCAATCAAACCTCTCGAGCCAAAAAACTGCTGCCTCACATTCTGATGGATGTGGTTCGTCATCTCCCACTAAGTCAGCTGGCACTGTAGAAGTATCCAGTGCACAGAGTCAGAAGCTCAAGCATAAACATGCACCTGAGAGGCCGTTTGAAGAAGTCAAAGCAAAAGTGGATACTGGTTTAAGATCACATAGCAATCCAAAAGAGAGATCCACACCATTGGTCAAAAATGCAAAGAAGCGATTATCCTTGCCTAATAATGATCCTGGTAGTCAAAATCAAACGGTGAGAAATTCCACTGGCAAAGCAACCATGGCGAAGTCAATCAACGATAAACCAAAGTCAATTTCCAGATCAGGTGACTCAAAATCTGCAAAACCTAGATCGCTGAATTGA 1449 42.58 MDQTAPKCGRDVSNGEFHLLFSVGCKKSGKSRIMFLAVGQFLVNTVECTMGVSGKWFKALVGSKKSEKSQSSEHDENARTVTNKFWHRRKHSVDIDADKLQHEFNSNFTPFVEESNALSEPEAVSIPSDSLQTYDALHSQQNDIEEQAAIRIQTMFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESETAQQKLQQELENQARVREIEEGWCDSVGSVEDIQAKLIKRQEAAAKRERAMAYALAHQWQAGSRQQAALSQFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMIRENGLSEGKSNTKSHLKTTAKKTNLVTDQSNLSSQKTAASHSDGCGSSSPTKSAGTVEVSSAQSQKLKHKHAPERPFEEVKAKVDTGLRSHSNPKERSTPLVKNAKKRLSLPNNDPGSQNQTVRNSTGKATMAKSINDKPKSISRSGDSKSAKPRSLN 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27419827 27428987 + CePI673135_03g012350.1 Cec03g1235 198859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1235 482 MobiDBLite consensus disorder prediction 329 482 - -
Cec03g1235 482 ProSiteProfiles IQ motif profile. 169 196 - -
Cec03g1235 482 PANTHER IQ-DOMAIN 5-RELATED 53 437 - -
Cec03g1235 482 ProSiteProfiles IQ motif profile. 145 173 - -
Cec03g1235 482 SMART iq_5 144 166 IPR000048 GO:0005515(InterPro)
Cec03g1235 482 SMART iq_5 167 188 IPR000048 GO:0005515(InterPro)
Cec03g1235 482 MobiDBLite consensus disorder prediction 329 387 - -
Cec03g1235 482 MobiDBLite consensus disorder prediction 388 416 - -
Cec03g1235 482 MobiDBLite consensus disorder prediction 435 464 - -
Cec03g1235 482 Pfam IQ calmodulin-binding motif 147 166 IPR000048 GO:0005515(InterPro)
Cec03g1235 482 Gene3D - 143 192 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1537 Cec-Chr1:29958930 Cec03g1235 Cec-Chr3:27419827 4.80E-11 dispersed
Cec03g1235 Cec-Chr3:27419827 Cec09g2145 Cec-Chr9:38401423 2.80E-33 dispersed
Cec03g1235 Cec-Chr3:27419827 Cec05g1978 Cec-Chr5:31798588 6.30E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1235 - - - 0.0