Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1344 ATGTTTCAAGACGAAGGCACATCCTCCATCACTTCCTCCCCTCTCCAGTTCTTCACAATGATGTCTCTTTCCCCTAAATTGGGTTCTCCATATCCATGGCTTAGAGAGCTTAAATCTGAGGAGAGGGGCTTGTATCTAATCCATTTGTTGCTTACTTGTGCAAATCATGTGGCTGTTGGTAGCCTTGACAGTGCTAATCTTGCCCTTGATCAAATATCTCATCTTGCTTCTGCAGATGGTGATACAATGCAGCGAATTGCAGCATATTTCGCCGAGGCTCTCGCGGATAGGATCCTCAAGACTTGGCCTGGTCTTTACAAGGCATTCAACTCTACTAAGATACCAATGGTTTCAGAGAAGATTCTTGTTAAGAAACTGTTCTTTGAAATGTTTCCATTCCTCAAGGTGGCTTTTGTGCTTACTAATCAAGCTATTGTTGAAGCCATGGAGGGAGAAAAGATGATTCATATAATTGATCTCAATGCTAATGAAACTGCTCAGTGGCTTGCTCTTTTGCAAGTTTTGAGTGTGAGGCCTGAAGGACCTCCACATTTGAGAATCACTGGAGTTCATCCACAGAAAGAGGTTCTGGATCAAATGGCTCGTAGGCTGACCGATGTAGCCGAGAAATTGGACATCCCGTTTCAATTCAATTCGGTTATCAGCCGACTAGATGATCTTGATATGGAAAAGCTTCGTGTGAAAACTGGGGAGGCTTTGGCCATCAATTCAGTTCTTCAGTTGCACACCCTTTTGGGCTGTGATAATGAAGTCTTGCAAAAGCCATCTCCATCAGCAGCCAAGAGTGCAAATGGAGTTCAATACTCGAGATACCCACATCTGAACCAAACCACCTTGAGTGACTTACTCGACAAGGATTTGGTTAACGGATGTAGTCCAAGTCCCGATTCAGTTTCCTCATCAGCATTATCTCAGGCTAATGCGACGAAGATCGATAGCTTTTTGAATGGATTGTGGAGTTTGACGCCAAAGGTGATGGTGGTAACAGAACAAGATTCTAACCATAATGGTTCAACACTTATGGAGAGATTACTGGAGGCTCTCCACACATATGCAGCTATCTTTGACTGTTTGGAGTCTAACATGTCAAGAACATCCCTGGAGAGGTTGAAGTTGGAAAAGATGCTATTTGGAGAAGAGATTAAGAACATCATAGCTTGTGAGGGAGCTGAAAGGAAGGAACGACATGAAAAACGAGAGAAATGGAGTCAACGGTTCGATGTTGTGGGGTTCAGGCATGTGTCTTTGAGTTATTATGGCATGATGCAGGCTCGGAGCTTGCTGCAGGGGTATGGTTGTGATGGTTATAGGATGAAGGAAGAGAATGGCTGTGTGATGATTTGTTGGCAAGATCGTCCATTGTTCTCGGTTTCGGCTTGGAGATGTTGTAAGTAG 1416 43.86 MFQDEGTSSITSSPLQFFTMMSLSPKLGSPYPWLRELKSEERGLYLIHLLLTCANHVAVGSLDSANLALDQISHLASADGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKIPMVSEKILVKKLFFEMFPFLKVAFVLTNQAIVEAMEGEKMIHIIDLNANETAQWLALLQVLSVRPEGPPHLRITGVHPQKEVLDQMARRLTDVAEKLDIPFQFNSVISRLDDLDMEKLRVKTGEALAINSVLQLHTLLGCDNEVLQKPSPSAAKSANGVQYSRYPHLNQTTLSDLLDKDLVNGCSPSPDSVSSSALSQANATKIDSFLNGLWSLTPKVMVVTEQDSNHNGSTLMERLLEALHTYAAIFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGAERKERHEKREKWSQRFDVVGFRHVSLSYYGMMQARSLLQGYGCDGYRMKEENGCVMICWQDRPLFSVSAWRCCK 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30226232 30227647 + CePI673135_03g013440.1 Cec03g1344 198968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1344 471 ProSiteProfiles GRAS family profile. 37 468 IPR005202 -
Cec03g1344 471 Pfam GRAS domain family 46 468 IPR005202 -
Cec03g1344 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 467 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009739(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1344 Cec-Chr3:30226232 Cec05g2301 Cec-Chr5:34292711 3.10E-165 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29235 PF03514 GRAS 1.20E-141 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1344 - - - 0.0