Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1406 ATGGTGAACCCACCACTCCCCCTCCAGCAAATATCCCCAAAAATGGCTGCCACGAACACCAATGTCGCCGGCGACGTCGACGATCGCGTCTTGGCCACCGCTCAGCAGATCGTCAAAAGCTTCAATACTCCTAAAGAGGTCCGTGAGGATATGCTCTTGATTCTCTCTAGTTTTGATAATCGTCTTTCCAGTATTAGTAGTATGATCAATAGTGATGACTCCAAGACTAAGAACGATAGGTTGGACGCCGCCGAGAAGGTGATTCTACGTTGGGACACAAATTCCGATGTGTCGAGTCGGTCGTTTAATTGGGAGGATTCGCGGGACGAGGCGGCTGAATATTTATCGGCGGTGGATGATATACTCCAGTTAATGGAAGAGCTTTCAATTGGGTCTGAATCGACCGACATCGTAGACCGAGCAGAAAACGCGATCCAAATGGCGATGTGTCGGCTCGAGAGCGAATTTCGCCATATCTTGATCCAGAGCACAGTCCCTCTCGACGCCGAGCGGCTTTACGGCTCGATCCGTAGAGTTCACCTCTCGTTTGCGTCACATTACAGTGAAATTGACGACGAATTCGAGAGTTTCACCGAGGAAAGTTGCAGTTCCGGGCGATTTCATGAGCGAGGTGCGACAATTGGAGAAGATTCTTGGGTTGATTTGATCCATCCTGATGCGGCTGTTGATCTTTCAGAGATTGCGGACCGTATGATTCGCTCTGGCTATGAAAAGGAGTGTGTTCAAGTCTATAGCACTGTTCGTCGTGATGCTTTGGACGAGTGCTTGGCGATTCTTGGCGTCGAACGACTCAGCATTGAGGAGGTTCAGAAAAGTGATTGGAAATTCTTGGATGAGAAGATGAAGAAATGGATTCAGGCAGTCAAAATTACAGTTCGGTTGATTTTGGAAGGTGAGAAGAGGCTCTGTGATCAGATTTTCAATGGCGCTAATGAATCCATGGAGATTTGTTTTAACGAAACAGCAAAAGGGTGTGTAATGCAGCTATTGAATTTTGGTGAGGCAGTGGCTATTGGGAAGAGATCACCTGAGAAGCTGTTCCGAATCTTGGATATGTACGACGCTTTGGCTGGGGTTTTGCCCAACTTAGAAGCCATGGTTTCTGATGGATTTTTGATCACTGAAGCACATGGAGTATTGTCGAGACTAGGAGAAGCAGCCACAGGGACATTTGCCGAGTTTGAGAATGCCATTAAAAGCGAAAATTCGAAGAAAGCAATGCAAAACGCCGAGATTCACCCACTTATTCGATATGTAATGAATTATGTTAGATTGCTGGTTGATTACAGTAAGACAATGAACTCTCTTTTAGAAGACGAGGAAGTGCAAGACTTGCCAAATGAGAGGGATAATGACGATAATCTGCAGTTGGAAAGTACATCACCTTTAGCTCGTAGATTATTAATGCTGTTATCGTCTTTGGAGTCCAATCTTATGGAAAAATCCAAGTTGTATGAGGATGTTGCTATGCAGTTTATATTTCTAATGAACAATATACTGTACATAGTGAAAAAGGTGAAAGATTCTGAGCTTGCCCAGCTGCTTGGCGATAACTGGCTTCGTAGGCATAGTGGCCAAATTCGCCAATATGAAACGAGTTACCTTAGAGCTTCTTGGAGCAAAGTTTTGTCTTGCTTAAAGGATGAAGGTATTGGTGGGAGCACAAGCAATGCCTCCAAGGTAGCTTTGAAGGAAAAGTTCAAGAATTTCAATGCAGGTTTTGAGGAAATCTGCAGGGTTCAAACAGCTTGGAAGGTATCAGATGCTCAACTACGCGATGAGCTGATAATATCCGTTTCGGAGAAGGTGATTCCAGCGTATCGCTCCTTCTTAGGAAGGTTTAGAAATCAGTTAGAGAGTGGAAGGAATTCCGGGAAGTACATAAAGTACACGCCAGAGGATTTAGAGAACTCTCTATCAAATTTGTTTGAAGGATCAGCTGCTGTATTACATCACTTGCGAAGAAAGGGTACTTGA 1998 44.69 MVNPPLPLQQISPKMAATNTNVAGDVDDRVLATAQQIVKSFNTPKEVREDMLLILSSFDNRLSSISSMINSDDSKTKNDRLDAAEKVILRWDTNSDVSSRSFNWEDSRDEAAEYLSAVDDILQLMEELSIGSESTDIVDRAENAIQMAMCRLESEFRHILIQSTVPLDAERLYGSIRRVHLSFASHYSEIDDEFESFTEESCSSGRFHERGATIGEDSWVDLIHPDAAVDLSEIADRMIRSGYEKECVQVYSTVRRDALDECLAILGVERLSIEEVQKSDWKFLDEKMKKWIQAVKITVRLILEGEKRLCDQIFNGANESMEICFNETAKGCVMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPNLEAMVSDGFLITEAHGVLSRLGEAATGTFAEFENAIKSENSKKAMQNAEIHPLIRYVMNYVRLLVDYSKTMNSLLEDEEVQDLPNERDNDDNLQLESTSPLARRLLMLLSSLESNLMEKSKLYEDVAMQFIFLMNNILYIVKKVKDSELAQLLGDNWLRRHSGQIRQYETSYLRASWSKVLSCLKDEGIGGSTSNASKVALKEKFKNFNAGFEEICRVQTAWKVSDAQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRNSGKYIKYTPEDLENSLSNLFEGSAAVLHHLRRKGT 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31405084 31407081 - CePI673135_03g014060.1 Cec03g1406 199030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1406 665 Gene3D Exocyst complex component Exo70 86 657 - -
Cec03g1406 665 SUPERFAMILY Cullin repeat-like 79 651 IPR016159 -
Cec03g1406 665 Pfam Exo70 exocyst complex subunit C-terminal 289 647 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cec03g1406 665 Pfam Exocyst complex component Exo70 N-terminal 81 162 - -
Cec03g1406 665 PANTHER EXOCYST COMPLEX PROTEIN EXO70 68 653 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cec03g1406 665 FunFam Exocyst subunit Exo70 family protein 97 658 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0044 Cec-Chr3:421672 Cec03g1406 Cec-Chr3:31405084 1.30E-107 dispersed
Cec03g0358 Cec-Chr3:3997738 Cec03g1406 Cec-Chr3:31405084 3.30E-242 dispersed
Cec03g1406 Cec-Chr3:31405084 Cec07g1746 Cec-Chr7:32994799 5.00E-121 dispersed
Cec03g1406 Cec-Chr3:31405084 Cec02g2161 Cec-Chr2:39048651 3.60E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1406 K07195 - csv:101205970 1124.77