Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1445 ATGGCAGTAGGTGCTGGGGAATGGTCTGTTGTCTATGAGCATGCATATTCACTTGCGCAAAACCTGGATCCTAATAGTGAAAGAAGAGGTGTTTTGCAATCCAAAACTGGTTTGATGTCTGTCATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAACGATAGATAGAAGCCAGGACATTACTCGGTTACAGGAGTTCTACAAACTATACCGAGAGAAAAATAATGTAGATGAGCTTTGGGAAGGTCAAATGAAATTTAGGGAATCTGGTGCTTTCAGTGGTAATCTTGGAAAGTTGGAACGGAAAACGCTGAAGCGAAACAAAGTCTTTGCAACCCTAAAAGTATTAGCAATGGTACTGGAGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGACTCATGGAATTGGATGCGACAAAGACAGAGGACCTAATTGCGTGTAATATTATTCCATTAGATGCTCCTTCTGTGACAAATGCTATTGGGTCCTTGACTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTCAGTGGCCTTCCAAAGTTGCCCGCAGAATTTTCCATTCCGGAGACCAGAAGTCCTGACATGCTTGACTTTCTACACTTTGTTTTTGGATTTCAGGTTTGGATTTCTATGTTGGGTGGTTGTATAGAACTCAATCCCGTCCATTAA 678 42.18 MAVGAGEWSVVYEHAYSLAQNLDPNSERRGVLQSKTGLMSVIKQKLAKREGGTIDRSQDITRLQEFYKLYREKNNVDELWEGQMKFRESGAFSGNLGKLERKTLKRNKVFATLKVLAMVLEQLSDAIPEEMKRLMELDATKTEDLIACNIIPLDAPSVTNAIGSLTEVQAAVSALKYFSGLPKLPAEFSIPETRSPDMLDFLHFVFGFQVWISMLGGCIELNPVH 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32249727 32255584 + CePI673135_03g014450.1 Cec03g1445 199069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1445 225 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 10 209 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1445 Cec-Chr3:32249727 Cec06g1965 Cec-Chr6:32898396 4.50E-50 dispersed
Cec03g1443 Cec-Chr3:32137507 Cec03g1445 Cec-Chr3:32249727 4.30E-93 proximal
Cec03g1445 Cec-Chr3:32249727 Cec03g1450 Cec-Chr3:32363531 7.50E-37 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1445 K11000 - csv:101216435 332.413