Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1450 ATGAGCAAAATTTTCAACCAGAGAATGACACGAGGCGAGGAGTTGTGGGAGCGCTTAGTTCAAGCAGCCTTAAGAAGGGATAGAATTGGCATTGATGCTTATGGACCAAACATTATGGAAATTGATGAAATCTTGATAGCTGCAGATGAAATCCAAGATGAAGATCCCAATATCTCGAGAATCTTATGTGAGCATGCATATTCACTTGCGCAAAACCTGGATCCTAATAGTGAAGGAAGAGGTGTTTTGCAATCCAAAACTGGTTTGATGTCTGTCATTAAGCAAAAGCTAGCCAAGAGGGAGGGTGGAACCATAGATAGAAGCCATGACATTACTCGGTTACAGGAGTTCTACAAACTATACCAAGAGAAAAATAGTGTAGATAAGCTTTGGGAAGGTGAAATGAAATTGAGGGAATCTGGTGCTTTCAGTGCAATGGGAAAGCGTACGGGTAGTTTTAGAAAGAGGAGGAACAAGATCCATACTCTCTGTGTGCGGTGTGGCCACCGCAACTTCCATCTCCGGAAGAGTTGCTGTGCAGCCTATGCATTCCCTGTTGCTCGCAAGTGA 570 43.51 MSKIFNQRMTRGEELWERLVQAALRRDRIGIDAYGPNIMEIDEILIAADEIQDEDPNISRILCEHAYSLAQNLDPNSEGRGVLQSKTGLMSVIKQKLAKREGGTIDRSHDITRLQEFYKLYQEKNSVDKLWEGEMKLRESGAFSAMGKRTGSFRKRRNKIHTLCVRCGHRNFHLRKSCCAAYAFPVARK 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32363531 32374247 + CePI673135_03g014500.1 Cec03g1450 199074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1450 189 Gene3D - 145 189 IPR011331 GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro)
Cec03g1450 189 SUPERFAMILY Zn-binding ribosomal proteins 146 187 IPR011332 GO:0006412(InterPro)
Cec03g1450 189 PANTHER 60S RIBOSOMAL PROTEIN L37 146 189 - GO:0003723(PANTHER)|GO:0022625(PANTHER)
Cec03g1450 189 Pfam Ribosomal protein L37e 148 189 IPR001569 GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1450 Cec-Chr3:32363531 Cec06g1965 Cec-Chr6:32898396 1.00E-34 dispersed
Cec03g1445 Cec-Chr3:32249727 Cec03g1450 Cec-Chr3:32363531 7.50E-37 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1450 K11000 - csv:101216435 214.542