Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1553 ATGGCCCTCTCCATTTCTTCCACTGCTCTCTCGACCTTCCCAATCAGAGAAACATTTCACAGAGGACATTTTCCGGGAAAATTCCCAAATTATAAGCTCCGGCGAGATTACTCCGATTTGAAAGCTGCAAAGTCCGGCGTGTCCACCGTCTGTGAACCTCTCACTCCCGACAGACCGCTCTGGTTCCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTCCCTGGCGATTTTGGCTTCGATCCACTTGGATTGGGTTCTGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCAAGATGGGCAATGCTAGCCGTGGCCGGAATCCTACTACCAGAATGGTTCGAAAGCTTAGGATTGATACAAAATTTCTCATGGTACGACGCCGGAGCGCGCGAGTATTTTGCAGACCCAACGACATTGCTGGTGGTGCAGTTGGCATTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCAGACTTGGTCAATCCGGGCAGCGTGGATGTTGACCTAAAGCTGCCCCACAAAAAGAAGGCAAAGCCAGACGTGGGCTACCCGGGCGGGTTTTGGTTTGACCCCATGATGTGGGGCAGGGGCTCGCCGGAGCCGGTCATGGTGCTACGGACTAAAGAGATCAAGAATGGGCGGTTGGCCATGTTGGCGTTTGTTGGATTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCGCTTGAGAATCTCGCCGCCCACGTGGCAGATCCTGGCCATTGCAACATCTTTTCGGCGTTTAGTTCGAGTTCGGGTTGA 798 55.14 MALSISSTALSTFPIRETFHRGHFPGKFPNYKLRRDYSDLKAAKSGVSTVCEPLTPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGAREYFADPTTLLVVQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSSSG 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33686161 33689256 + CePI673135_03g015530.1 Cec03g1553 199177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1553 265 FunFam Chlorophyll a-b binding protein, chloroplastic 68 253 - -
Cec03g1553 265 SUPERFAMILY Chlorophyll a-b binding protein 57 261 - -
Cec03g1553 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 257 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cec03g1553 265 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Cec03g1553 265 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1553 Cec-Chr3:33686161 Cec11g1417 Cec-Chr11:28360103 8.50E-88 dispersed
Cec03g1553 Cec-Chr3:33686161 Cec06g1811 Cec-Chr6:31568582 1.80E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1553 K08908 - csv:101211430 528.48