Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1558 ATGGCTTTGGATTCGAACAATGGCGGCGAAGTTGGAGTGGATAACTCTCTCCAGTCCATCTGTTACAAGCGGGGCTCCTTGCGGCTGCTCGATCAGAGGAAACTCCCTTTGGAAACTGTCTACTTGGATATCAAGGACGCAACAGATGGATGGCACGCAATAAGGGATATGGTAGTACGCGGGGCACCTGCCATTGCTATTGCAGCAGCCCTTGCTTTGGCAGCAGAAGTGTACAACTCAGACCCTTGTAATGGGACGCCCAACGATGCAGCTTCATTCATTGCAGAGAAATTGGACTACTTAGTCTCCAGCCGGCCAACTGCAGTTAATCTTGGCGATGCTGCTATAAAACTTAAAGAAATTGTATCTGGTGCTGCTGCAATTTCTTCTGAAGCCAAGAGTGTCTTCCAAGCATATATAGAGGCTGCCGAAGCAATGCTGGAGGATGATGTTGCTTCAAACAAAGCCATTGGGTCCTATGGAGCAACTTATATCCGTGATCAACAAAAATTGTTGGAGAAGTTTTCCGTTCTAACACACTGCAATACGGGCAGTCTAGCAACAGCTGGATATGGTACTGCCCTTGGTGTTATTCGTGCACTTCACTCTGCTGGTGTGTTAGAAAGGGCATACTGTACAGAAACGCGGCCCTTTAATCAAGGATCTCGACTCACAGCCTATGAGTTGGTCCATGAAAAGATACCTTCTACTCTGATAGCTGATTCTGCTGCCGCCGCCTTAATGAAATTTGGAAGAGTGAATGCTGTTGTAGTTGGGGCAGATCGTGTAGCTGCAAATGGTGATACTGCAAATAAGATTGGAACCTATAGTCTTGCATTGTGTGCAATGCATCACAATATTCCATTCTTTGTGGCTGCACCATTGACTTCAATAGACTTATCCCTTTCTTCTGGAGAAGAAATCGTTATAGAGGAAAGGTCTCCCAAAGAGTTGTTGAACTCCCGTGGAGGTCTCGGTGAGCAAGTCGCAGCATCTGGTATCGCTGTCTGGAACCCTGCTTTCGATGTTACTCCTGCTCATCTGATTTCTGGAATCATAACGGAAAAGGGAGTCATCACGAAAGCGGCGGGTTCTGAATCTTTCAACATAAAGGAGTTTGTTCAAAAGACGGAGGGGACTCATGCATAG 1149 46.56 MALDSNNGGEVGVDNSLQSICYKRGSLRLLDQRKLPLETVYLDIKDATDGWHAIRDMVVRGAPAIAIAAALALAAEVYNSDPCNGTPNDAASFIAEKLDYLVSSRPTAVNLGDAAIKLKEIVSGAAAISSEAKSVFQAYIEAAEAMLEDDVASNKAIGSYGATYIRDQQKLLEKFSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYCTETRPFNQGSRLTAYELVHEKIPSTLIADSAAAALMKFGRVNAVVVGADRVAANGDTANKIGTYSLALCAMHHNIPFFVAAPLTSIDLSLSSGEEIVIEERSPKELLNSRGGLGEQVAASGIAVWNPAFDVTPAHLISGIITEKGVITKAAGSESFNIKEFVQKTEGTHA 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33713557 33716882 + CePI673135_03g015580.1 Cec03g1558 199182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1558 382 Gene3D - 15 171 IPR027363 -
Cec03g1558 382 Gene3D - 172 377 IPR042529 -
Cec03g1558 382 FunFam Methylthioribose-1-phosphate isomerase 15 207 - -
Cec03g1558 382 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 17 370 IPR005251 -
Cec03g1558 382 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 15 375 - GO:0019509(PANTHER)|GO:0046523(PANTHER)
Cec03g1558 382 FunFam Methylthioribose-1-phosphate isomerase 173 371 - -
Cec03g1558 382 Pfam Initiation factor 2 subunit family 59 360 IPR000649 GO:0044237(InterPro)
Cec03g1558 382 SUPERFAMILY NagB/RpiA/CoA transferase-like 16 363 IPR037171 -
Cec03g1558 382 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 44 361 IPR011559 GO:0044249(InterPro)
Cec03g1558 382 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 18 361 IPR005251 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1558 K08963 - csv:101210526 681.019