Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1588 ATGGCCAACTCTGAATTTCTCTGCTCCTCAGCTCTCTCCGAAACTGATTTTGTTCCTCAATCAAAATCCTTTTCCTCTGTTTCGGCCTCCGACCATTGGGTCAAGGCTGCCAACGCTCTCAGCCACACCCATTTTGAGGAGGTTTATCGCATGTTGTCGGAGTTTCAAGAGGCTCAAACTGTTGATATCGAAGGCACCACCCTCACCGTCGCTCGGGTGACCGCCGTTGCTCGTCGAAGCGATGTCAAAGTCGTCCTGAATGAAGCTGTGGCACATGATCGTGTGGCCAACAGTGCAAAATGGATTGCTGAGAAAATCTCTAAGGGAATTGATATATATGGAGTTACCACTGGCTTTGGTGCCACCTCCCACCGGCGTACGACCAAACTGGCCGATCTCCAAACAGAACTCATTAGATTCCTCAATGCCGGAGTCATCGGAAAAGACAATCTTCCATCTAGCTACTCAAAGGCGGCCATGCTTGTCAGAACAAACACATTGATGCAAGGCTACTCAGGCATTCGTTGGAAAATTCTCGAGGCTGTGGTGAAGCTCATGAATGAGAACTTGATCCCTAAATTGCCTTTGAGAGGGACAATCACAGCTTCTGGAGATCTTGTTCCACTGTCTTATATTGCTGGTGTTATCACTGGAAGGCATAATTCCAAGGTTACCACCATTGAAGGCGATGAGATTACTGCCATAGAAGCTCTCAAGCGAGCTGGAATTGAAGGCCCATTTGAGCTTCAAGCAAAGGAAGGTTTAGCTCTTGTCAATGGAACCGCTGTTGGGTCAGCCGTTGCTGCCACAGTTTGCTATGACGCCAACATTTTGGCTCTTTTAGCTGTCGTCCTCTCTGCTTTGTTCTGTGAAGCCATGCTCGGGAAGCCAGAATTTGCAGACCCATTGACCCATAAGCTCAAGCACCACCCTGGCCAGATTGAATCCGCCGCAGCCATGGAGTTTCTCTTGGACCAAAGCGACTTTATGAAAGAAGCAAAAAGCCGCAATGAAAATGACCCATTGACAAAGCCAAAACAAGATCGTTATGCACTACGAACATCTCCACAATGGCTCGGACCCCAAATCGAAGTCATTCGAATGGCAACCCATTCGATTGAAAGGGAAATCAACTCTGTGAATGATAACCCATTAATCGACATCGATCGAGATCTAGCTCTACACGGAGGAAACTTTCAAGGAACCCCAATTGGAGTCTCCATGGATAATCTCCGAATCGCCATTGCTGCAATTGGAAAGCTAATGTTTGCCCAATTCTCTGAACTCGTCTGTGATCATTACAACAATGGATTACCATCTAATTTGAGCGGCGGGCCAAACCCTAGCTTGGACTACGGCTTCAAAGGAGCGGAAATCGCCATGGCTGCTTATTGTTCTGAGCTTCAATACTTAGCAAACCCTGTCACAACCCATGTCCAAAGTGCAGAACAACATAATCAAGATGTAAACTCTCTAGGTCTAATCTCAGCCAGAAAATCCGCCGAAGCCATTGAAATTCTCAAGCTCATGTCAGCTACATACATGGTGGCGCTTTGCCAGGCAATCGATTTAAGACAATACGAAGAAAATATGAGGGAAGTAGTGAAAAATGCTCTTCTACAAACCATTAAGAAAACCTTATACGTTGCAGAGTATGGATCTCTTCTCGAATCGCGATTCTGCGAGAAAGACCTATTACAAGTAATCGAGCGCGAGGCGGTCTTCTCCTACATCGACGATCCAACCAACACATCCTACACTCTAATCCCAAAATTACTGGAAGTTTTAGTCGAAAAAGCACTGAAAGGAGTTACAACAGGCAAAAGCGAGAATGAAAACGAAACAGGGATTGCCATTTTCAAGCAAATCCCAGGGTTTCTAGAGGAATTAAAAGCGAAATTGGAGAAAGATGTCGAAAATGCGAGAGAGAGATTCGAGAATGGTGATTTCGAAGTGGAAAATAGAATCAAGAAATGCAGCACTTACCCGATCTATCGATTCGTGAGGTGTGAAGTGGGGACTCAACTGTTGAGTGGGGCGAAGAAAGTGAGCCCTGGAGAAGATATTGAGAAAGTTGTGGAAGCCATTGATGAAGGGAAGCTTGGAAATGCTGTGATTCAGTGTTTGAAGAATTAG 2136 45.74 MANSEFLCSSALSETDFVPQSKSFSSVSASDHWVKAANALSHTHFEEVYRMLSEFQEAQTVDIEGTTLTVARVTAVARRSDVKVVLNEAVAHDRVANSAKWIAEKISKGIDIYGVTTGFGATSHRRTTKLADLQTELIRFLNAGVIGKDNLPSSYSKAAMLVRTNTLMQGYSGIRWKILEAVVKLMNENLIPKLPLRGTITASGDLVPLSYIAGVITGRHNSKVTTIEGDEITAIEALKRAGIEGPFELQAKEGLALVNGTAVGSAVAATVCYDANILALLAVVLSALFCEAMLGKPEFADPLTHKLKHHPGQIESAAAMEFLLDQSDFMKEAKSRNENDPLTKPKQDRYALRTSPQWLGPQIEVIRMATHSIEREINSVNDNPLIDIDRDLALHGGNFQGTPIGVSMDNLRIAIAAIGKLMFAQFSELVCDHYNNGLPSNLSGGPNPSLDYGFKGAEIAMAAYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKSAEAIEILKLMSATYMVALCQAIDLRQYEENMREVVKNALLQTIKKTLYVAEYGSLLESRFCEKDLLQVIEREAVFSYIDDPTNTSYTLIPKLLEVLVEKALKGVTTGKSENENETGIAIFKQIPGFLEELKAKLEKDVENARERFENGDFEVENRIKKCSTYPIYRFVRCEVGTQLLSGAKKVSPGEDIEKVVEAIDEGKLGNAVIQCLKN 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33988810 33990945 + CePI673135_03g015880.1 Cec03g1588 199212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1588 711 Gene3D - 528 654 IPR023144 -
Cec03g1588 711 Gene3D - 21 261 IPR024083 -
Cec03g1588 711 Pfam Aromatic amino acid lyase 68 534 IPR001106 -
Cec03g1588 711 CDD PAL-HAL 66 525 IPR001106 -
Cec03g1588 711 SUPERFAMILY L-aspartase-like 32 710 IPR008948 GO:0003824(InterPro)
Cec03g1588 711 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841(InterPro)
Cec03g1588 711 NCBIfam phenylalanine ammonia-lyase 31 710 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Cec03g1588 711 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Cec03g1588 711 PANTHER HISTIDINE AMMONIA-LYASE 27 711 IPR001106 GO:0016841(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1588 Cec-Chr3:33988810 Cec04g1053 Cec-Chr4:30098872 7.00E-238 dispersed
Cec03g1588 Cec-Chr3:33988810 Cec04g1051 Cec-Chr4:30082408 1.10E-235 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1588 K10775 - csv:101205510 1258.05