Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1590 ATGGTAACTTCAATGGAATGCTTGGTTGTTACCAATATATCAAAAATATTCCCCAAGGATACTGAAGCACCTGCTGCAGGTGTAGATGACATGACAAAGCTGTCATACTTGCATGAACCTGGGGTTCTGAGCAACTTGGCAACCAGATATGAACTCAATGAAATTTATACATACACTGGAAATATACTTATTGCAATAAATCCATTCCAAAGATTACCTCATCTTTATGATACTCACATGATGGAACAATACAAAGGAGCTGGATTTGGAGAACTAAGTCCTCATGTCTTTGCAGTTGCTGAAGTGGCATATAGGGCAATGATTAATGAAGGAAAAAGCAATTCAATTCTAGTTAGTGGAGAAAGTGGTGCTGGTAAGACTGAGACCACAAAGATGCTCATGCGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGGAGAATATCTGGGGCAGCTGTTCGAACTTATTTGCTTGAAAGGTCTCGAGTATGTCAGATCTCGAATCCTGAAAGAAATTATCATTGCTTTTACCTTCTCTGCGCAGCTCCTCCTGAGGAAAGGGAGAAGTATAAATTAGCAGACCCTAAATCGTTCCACTACTTAAATCAATCTAGCTGCTTTGAGTTGGATGGAGTGAACGATTCCCATGAATATCTTGCAACCAGAAGGGCTATGGATGTAGTTGGAATCAGCGAGGAGGAGCAGGAGGCAATTTTTAGGGTTGTAGCTGCAATTTTGCATCTTGGAAATATTGAATTTTCCAAGGGAGAGGAGATTGATTCTTCAGTCATTAAGGATGAAAAATCCAGATTCCATCTTAATACCACAGCCGAACTGCTTAAGTGTGATGCAAAGAGTTTGGAGGATGCACTGATTCAACGTGTTATGGTAACACCAGAAGAGGTTATCACTCGAACTCTTGATCCTGTGGCTGCTTTGGGTAGCAGGGATGCCTTGGCTAAAACGATCTATTCGCGACTCTTTGACTGGCTTGTGGAGAAGATTAACAATTCAATTGGGCAAGACCCGAATTCTAAATCATTGATTGGAGTTCTGGATATTTATGGATTTGAGAGTTTTAAATTCAACAGTTTTGAACAGTTCTGCATCAATTTTACAAATGAAAAACTGCAGCAACATTTCAATCAGCATGTTTTCAAAATGGAGCAGGAGGAATATACCAAAGAGCAAATCAATTGGAGTTATATTGAGTTTGTTGATAACCAGGATGTCTTGGATCTGATTGAAAAGAAACCAGGAGGAATTATCGCACTTCTGGATGAGGCCTGCATGTTTCCTAAATCTACACACGAAACATTTGCTCAGAAGTTATACCAGACTTTCAAGAACAACAAACGCTTCATTAAGCCTAAGCTATCTCGTACTAGTTTTACAATATCTCATTATGCTGGAGAGGTGACTTATTTGGCAGATCTATTCTTGGATAAAAACAAAGATTACGTGGTAGCAGAACATCAGGCCCTCTTGACAGCTTCAAAATGCCCCTTTGCGAGGGCTTTATTTCCTCCTCAACCAGAGGAAACAGCAAAATCCTCAAAATTTTCTTCCATTGGTTCACGTTTTAAATTACAACTTCAATCTTTAATGGAGACCTTAAATTCAACAGAGCCTCACTACATCAGATGTGTAAAGCCAAATAATGCGCTCAAGCCTGCTATTTTTGAGAACTCAAATGTTATCCAACAATTACGTTGTGGTGGTGTCCTTGAAGCAATTAGGATCAGCTGTGCTGGATATCCTACCAGAAGAACATTTTATGAGTTCCTCCTACGTTTTGGGGTTCTTGCACCAGAAGTTTTGGATGGAAACTATGATGACAAGGTAGCATGCCAGATGATCCTGGATAAAATGGGTTTGAAAGGATACCAGATTGGTAAGACAAAAATCTTCCTGAGGGCTGGGCAGATGGCTTCTCTGGATGCAAAGAGAACAGAGGTGCTTAGCAACGCTGCCAGAACTATTCAAATGCAAATTAGAACATTTATTGCACGCAAGGAGTTTGTTGCATTACGTAAAGCTGCTATACATGTGCAATCATTTACTCGAGGTGTTTTGGCTCGAAAACTATTTGAGCAGTTGCGACGGGAAGCAGCAGCTTTAAAGATCCAGAAGTGTTTCAAGCGATATATTGCCAGGAAATCATACTTAGGTTTGCTCTCATCTGCAATCACATTGCAAACAGGGTTAAGGGCAATGAAGGCTCGCGATGAATTCAGATTCAGAAAGCGTACTAAGGCAGCAATTATCATTCAGGCACGTTTGCGTTGTCACCTGGCGTATTCTTACTATAAGAGACTCCAAAAGGCTGCACTATACACACAGTGTGGTTGGAGGCGACGAGTTGCACGAAAGGAGCTAAGAAGTCTGAAAATGGCTGCAAGGGAAACTGGAGCACTCAAAGAAGCAAAAGACAAATTAGAAAAACGTGTAGAAGAACTTACATGGCGCTTGCAACTTGAGAAGAGGCTGAGGACTGATCTGGAAGAGGAGAAAGCCCAAGAAATTGCCAAATTACAAGATGCTTTACACAGCATGCAATTACAAGTTGAAGAAGCAAATGCTCAAGTTATCAAAGAGCGAGAGGCTGCTCAGAAAGCTATTGAAGAAGCACCTCCAGTTGTCAAGGAAACTCCAGTTTTCGTGGAGGATACCGAAAAAATCAATTCCTTAATGGCTGAGGTGGAGAGTTTAAAGGCTTCACTGCTGTCAGAAAAAACGTCAGCTGAAGAAGCTAGAAGAGCTTGTACAGATGCTGAAGCCAAAAATGTGGAGCTGACTAAAAGACTTCAAGATGCAGAGCAGAAGGTGGATCAGCTTCAGGAGTCAGTGCAGAGGCTTGAAGAGAAGCTTTCAAATTCAGAATCAGAGAACCAGGTACTTCGTCAACAAGCATTGACTATGTCGCCGACAGGAAAAGCTTTGTCTGCTAGACCAAAGTCAATGATTATTCAGAGGACACCAGAGAATGGAAATATTCCACATGGAGAGGCCAAAGTATCATCTGATACAACTCTTGCATTATCAAATGTACGTGAGCCTGAATCAGAGGAAAAACCACAGAAATCACTTAATGAGAAACAGCAGGAGAACCAGGATCTGCTAGTGAAGTGCATATCTCAAGATTTAGGATTTTCCGGAGGCAAACCAATTGCTGCTTGTGTCATATATAAATGTCTTCTTCACTGGAGGTCGTTTGAAGTTGAAAGAACCAGCATATTCGATCGAATCATTCAAACAATAGCTTCATCCATAGAGGTCCCGGATAACAATGATGTATTAACTTATTGGTTATCTAATACATCCACATTATTGTTGCTTCTTCAACACACTCTCAAAGCTAGTGGAGCTGCTAGCTTGACTCCTCAAAGGAGGAGAACTACTTCAGCTTCTCTTTTTGGAAGGATGTCTCAAGGATTAAGGGCTTCTCCACAAAGTGCTGGACTATCATTTCTTAATGGTCGGGGGCTTGGTAGATTGGACGATTTTCGACAGGTTGAGGCAAAGTATCCAGCACTATTGTTTAAGCAGCAGCTTACAGCGTTTTTGGAGAAAATATATGGAATGATAAGAGACAACCTAAAGAAAGAGATTTCGCCTTTACTTGGACTATGTATTCAGGCCCCTAGGACATCACGGGCGAGCTTAGTGAAAGGACGCTCCCAAGCAAACGCTATGGCTCAGCAAGCCTTAATTGCACATTGGCAAAGCATTGTGAAAAGCTTAGACAATTATTTGAAGATCATGAAAGCAAACTATGTACCTCCATTCTTGGTCCGCAAAGTTTTCACTCAGATATTCTCATTTATTAATGTCCAACTATTTAACAGCCTTCTTTTGCGGCGGGAGTGTTGTTCATTCAGCAATGGAGAGTATGTGAAAGCTGGCTTGTCTGAATTAGAACAGTGGTGTTCTGGAGCAACTGAGGAATATGCAGGTTCTGCCTGGGATGAATTAAAGCACATTAGGCAGGCTGTTGGATTCCTTGTTATACATCAAAAACCCAAAAAGACGTTGAATGAGATAACAAAAGACCTATGTCCTGTGCTTAGCATACAACAGTTGTATAGGATCAGTACAATGTACTGGGATGACAAATATGGCACACATAGCGTATCTTCAGAAGTTATTTCGAGCATGCGAATTCTGATGACTGAAGACTCCAACAATGCCATCAGCTCATTCCTGTTAGATGATGACTCTAGTATTCCATTTTCTGTGGATGATATTTCCAAATCAATGAAACAAGTAGATGTAACAGACATAGATCCTCCACCGCTGATACGAGAAAACTCCGGGTTCGGATTTTTGCTTCAACGTGCAGAGTAA 4356 41.0 MVTSMECLVVTNISKIFPKDTEAPAAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISNPERNYHCFYLLCAAPPEEREKYKLADPKSFHYLNQSSCFELDGVNDSHEYLATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFSKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTASKCPFARALFPPQPEETAKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALKPAIFENSNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLRAGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIHVQSFTRGVLARKLFEQLRREAAALKIQKCFKRYIARKSYLGLLSSAITLQTGLRAMKARDEFRFRKRTKAAIIIQARLRCHLAYSYYKRLQKAALYTQCGWRRRVARKELRSLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEIAKLQDALHSMQLQVEEANAQVIKEREAAQKAIEEAPPVVKETPVFVEDTEKINSLMAEVESLKASLLSEKTSAEEARRACTDAEAKNVELTKRLQDAEQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSMIIQRTPENGNIPHGEAKVSSDTTLALSNVREPESEEKPQKSLNEKQQENQDLLVKCISQDLGFSGGKPIAACVIYKCLLHWRSFEVERTSIFDRIIQTIASSIEVPDNNDVLTYWLSNTSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRGLGRLDDFRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAMAQQALIAHWQSIVKSLDNYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRILMTEDSNNAISSFLLDDDSSIPFSVDDISKSMKQVDVTDIDPPPLIRENSGFGFLLQRAE 1451
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 34001312 34015388 - CePI673135_03g015900.1 Cec03g1590 199214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1590 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 707 805 IPR027417 -
Cec03g1590 1451 Pfam DIL domain 1270 1374 IPR002710 -
Cec03g1590 1451 PANTHER MYOSIN 23 135 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cec03g1590 1451 Pfam Myosin head (motor domain) 136 642 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cec03g1590 1451 Pfam Myosin head (motor domain) 28 135 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cec03g1590 1451 FunFam unconventional myosin-Va 659 707 - -
Cec03g1590 1451 CDD MyosinXI_CBD 1035 1417 IPR037975 GO:0007015(InterPro)
Cec03g1590 1451 FunFam Myosin heavy chain 174 229 - -
Cec03g1590 1451 ProSiteProfiles Myosin motor domain profile. 26 654 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cec03g1590 1451 Gene3D - 368 545 - -
Cec03g1590 1451 Gene3D - 589 652 - -
Cec03g1590 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 707 IPR027417 -
Cec03g1590 1451 SMART iq_5 656 678 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 SMART iq_5 679 701 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 SMART iq_5 704 726 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 SMART iq_5 752 774 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 SMART iq_5 775 797 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 SMART iq_5 727 749 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 Gene3D - 174 232 - -
Cec03g1590 1451 ProSiteProfiles IQ motif profile. 728 757 - -
Cec03g1590 1451 Gene3D Kinesin motor domain 3 135 IPR036961 -
Cec03g1590 1451 ProSiteProfiles Dilute domain profile. 1084 1395 IPR002710 -
Cec03g1590 1451 Gene3D Myosin VI head, motor domain, U50 subdomain 234 367 - -
Cec03g1590 1451 ProSiteProfiles IQ motif profile. 680 709 - -
Cec03g1590 1451 FunFam Myosin XI D 589 652 - -
Cec03g1590 1451 ProSiteProfiles IQ motif profile. 776 805 - -
Cec03g1590 1451 Coils Coil 799 879 - -
Cec03g1590 1451 FunFam Class V myosin 361 502 - -
Cec03g1590 1451 ProSiteProfiles IQ motif profile. 657 683 - -
Cec03g1590 1451 SMART DIL_2 1270 1377 IPR002710 -
Cec03g1590 1451 CDD MYSc_Myo11 40 642 IPR036018 -
Cec03g1590 1451 ProSiteProfiles IQ motif profile. 753 779 - -
Cec03g1590 1451 SMART MYSc_2a 20 655 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cec03g1590 1451 ProSiteProfiles IQ motif profile. 705 734 - -
Cec03g1590 1451 PRINTS Myosin heavy chain signature 56 75 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cec03g1590 1451 PRINTS Myosin heavy chain signature 404 432 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cec03g1590 1451 PRINTS Myosin heavy chain signature 351 379 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cec03g1590 1451 PRINTS Myosin heavy chain signature 113 138 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cec03g1590 1451 Coils Coil 918 973 - -
Cec03g1590 1451 FunFam Myosin 2 234 348 - -
Cec03g1590 1451 Pfam IQ calmodulin-binding motif 659 677 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 Pfam IQ calmodulin-binding motif 681 700 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 Pfam IQ calmodulin-binding motif 754 774 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 Pfam IQ calmodulin-binding motif 707 725 IPR000048 GO:0005515(InterPro)
Cec03g1590 1451 FunFam unconventional myosin-Va 756 803 - -
Cec03g1590 1451 FunFam unconventional myosin-Va 708 755 - -
Cec03g1590 1451 Gene3D - 655 706 - -
Cec03g1590 1451 Gene3D - 754 804 - -
Cec03g1590 1451 Gene3D - 707 753 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1769 Cec-Chr2:35508051 Cec03g1590 Cec-Chr3:34001312 0.00E+00 dispersed
Cec03g1590 Cec-Chr3:34001312 Cec09g0359 Cec-Chr9:3013009 0.00E+00 dispersed
Cec03g1590 Cec-Chr3:34001312 Cec06g0135 Cec-Chr6:1338131 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1590 K10357 - csv:101204300 2720.65