Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g1594 | ATGAGGAAGGGAGGCTTCAGCAACAACCTCAATCTCAAGCTCAGTCTTCCTCAAGAAGAACAATCCATAGCGACGTTTTTAACGCAGAGCGGCACGTTTAAGGATGGTGATCTGCTCGTAAACAGAGATGGGGTTCGTATTGTTTCTCAAAGCGAAGTTGAAGCACCACCTCCGATTAAGCCTACAGATGATCAGTTGAGTTTAGCGGACATAGACATTATTAAAGTCATTGGAAAAGGAAATGGTGGAACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTCAGATGAAAATTGAAGAGTCTCACCGCAAGCAGATTGCACAAGAACTGAAAATCAATCAATCAGCACAGTGCCCTTATATTGTTGTCTGTTACCAATCTTTCTATGATAATGGATCTATATATATCATCCTAGAGTACATGGATGGAGGATCTTTAGCAGATTTTTTGAAAAAGGTTAAAAAGATTCAAGAACCATATCTTGCTGCCCTTTGTAAGCAGGTGCTGAAGGGGTTGTCGTACCTTCACCATGAAAGACACATCATCCATAGGGACTTAAAGCCTTCAAATTTATTAATAAACCATAGAGGGGAAGTCAAGATTACAGACTTTGGTGTCAGTGCGATTATGGCAAGCACATCTGGGGAGGCTAATACTTTTGTTGGCACATATAACTATATGTCCCCAGAGAGAATTGTGGGAGAGAGGTATGACAATAAAAGTGACATTTGGAGCTTGGGCCTGATATTACTCGAGTGTGCAACTGGAAAATTTCCTTATTCTCCACCAGAACAAGATGGAGGATGGGTGAACTTTTATGAGCTTATGGAAGCCATTGTTGAAGGCGAACCTCCTTCTGCTCCGGCTGACCAATTTACTCCCAACTTCTGTTCGTTCATTTCTGCATGTGTGCAAACGGACCCAAAGGATAGACTGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGTATGAAGATACGGATATTGACCTGTCATCTTACTTCAACGATGCTGGATCTCCACTTGCAACTTTCTAA | 1068 | 41.48 | MRKGGFSNNLNLKLSLPQEEQSIATFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLADFLKKVKKIQEPYLAALCKQVLKGLSYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGEANTFVGTYNYMSPERIVGERYDNKSDIWSLGLILLECATGKFPYSPPEQDGGWVNFYELMEAIVEGEPPSAPADQFTPNFCSFISACVQTDPKDRLSARELLEHPFIKMYEDTDIDLSSYFNDAGSPLATF | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 34045737 | 34048964 | + | CePI673135_03g015940.1 | Cec03g1594 | 199218 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g1594 | 355 | Pfam | Protein kinase domain | 73 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g1594 | 355 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g1594 | 355 | ProSiteProfiles | Protein kinase domain profile. | 71 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec03g1594 | 355 | SUPERFAMILY | Protein kinase-like (PK-like) | 55 | 337 | IPR011009 | - | |
Cec03g1594 | 355 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 17 | 351 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cec03g1594 | 355 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 351 | - | - | |
Cec03g1594 | 355 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 100 | IPR017441 | GO:0005524(InterPro) | |
Cec03g1594 | 355 | PRINTS | Tyrosine kinase catalytic domain signature | 146 | 159 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g1594 | 355 | PRINTS | Tyrosine kinase catalytic domain signature | 183 | 201 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g1594 | 355 | PRINTS | Tyrosine kinase catalytic domain signature | 249 | 271 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec03g1594 | 355 | FunFam | Mitogen-activated protein kinase kinase 6 | 41 | 150 | - | - | |
Cec03g1594 | 355 | CDD | PKc_MAPKK_plant_like | 69 | 335 | - | - | |
Cec03g1594 | 355 | FunFam | Mitogen-activated protein kinase kinase 6 | 152 | 350 | - | - | |
Cec03g1594 | 355 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 150 | - | - | |
Cec03g1594 | 355 | SMART | serkin_6 | 71 | 331 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g1594 | Cec-Chr3:34045737 | Cec07g1538 | Cec-Chr7:30964063 | 3.10E-53 | dispersed | |
Cec09g1113 | Cec-Chr9:10912502 | Cec03g1594 | Cec-Chr3:34045737 | 8.10E-19 | dispersed | |
Cec03g1594 | Cec-Chr3:34045737 | Cec03g1597 | Cec-Chr3:34064320 | 1.30E-16 | proximal | |
Cec07g0762 | Cec-Chr7:15458882 | Cec03g1594 | Cec-Chr3:34045737 | 4.10E-37 | transposed | |
Cec10g1402 | Cec-Chr10:28358272 | Cec03g1594 | Cec-Chr3:34045737 | 7.90E-64 | transposed | |
Cec11g0214 | Cec-Chr11:2311386 | Cec03g1594 | Cec-Chr3:34045737 | 3.30E-127 | transposed | |
Cec11g1200 | Cec-Chr11:24899978 | Cec03g1594 | Cec-Chr3:34045737 | 7.80E-39 | transposed | |
Cec11g0175 | Cec-Chr11:1928528 | Cec03g1594 | Cec-Chr3:34045737 | 7.30E-140 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71859 | PF00069 | Pkinase | 4.30E-72 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g1594 | K20603 | - | csv:101204545 | 693.73 |