Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1594 ATGAGGAAGGGAGGCTTCAGCAACAACCTCAATCTCAAGCTCAGTCTTCCTCAAGAAGAACAATCCATAGCGACGTTTTTAACGCAGAGCGGCACGTTTAAGGATGGTGATCTGCTCGTAAACAGAGATGGGGTTCGTATTGTTTCTCAAAGCGAAGTTGAAGCACCACCTCCGATTAAGCCTACAGATGATCAGTTGAGTTTAGCGGACATAGACATTATTAAAGTCATTGGAAAAGGAAATGGTGGAACTGTGCAATTAGTTCAGCACAAATGGACTGCTCAGTTTTTTGCATTGAAGGTAATTCAGATGAAAATTGAAGAGTCTCACCGCAAGCAGATTGCACAAGAACTGAAAATCAATCAATCAGCACAGTGCCCTTATATTGTTGTCTGTTACCAATCTTTCTATGATAATGGATCTATATATATCATCCTAGAGTACATGGATGGAGGATCTTTAGCAGATTTTTTGAAAAAGGTTAAAAAGATTCAAGAACCATATCTTGCTGCCCTTTGTAAGCAGGTGCTGAAGGGGTTGTCGTACCTTCACCATGAAAGACACATCATCCATAGGGACTTAAAGCCTTCAAATTTATTAATAAACCATAGAGGGGAAGTCAAGATTACAGACTTTGGTGTCAGTGCGATTATGGCAAGCACATCTGGGGAGGCTAATACTTTTGTTGGCACATATAACTATATGTCCCCAGAGAGAATTGTGGGAGAGAGGTATGACAATAAAAGTGACATTTGGAGCTTGGGCCTGATATTACTCGAGTGTGCAACTGGAAAATTTCCTTATTCTCCACCAGAACAAGATGGAGGATGGGTGAACTTTTATGAGCTTATGGAAGCCATTGTTGAAGGCGAACCTCCTTCTGCTCCGGCTGACCAATTTACTCCCAACTTCTGTTCGTTCATTTCTGCATGTGTGCAAACGGACCCAAAGGATAGACTGTCAGCACGTGAACTTTTGGAACATCCTTTCATCAAGATGTATGAAGATACGGATATTGACCTGTCATCTTACTTCAACGATGCTGGATCTCCACTTGCAACTTTCTAA 1068 41.48 MRKGGFSNNLNLKLSLPQEEQSIATFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKPTDDQLSLADIDIIKVIGKGNGGTVQLVQHKWTAQFFALKVIQMKIEESHRKQIAQELKINQSAQCPYIVVCYQSFYDNGSIYIILEYMDGGSLADFLKKVKKIQEPYLAALCKQVLKGLSYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMASTSGEANTFVGTYNYMSPERIVGERYDNKSDIWSLGLILLECATGKFPYSPPEQDGGWVNFYELMEAIVEGEPPSAPADQFTPNFCSFISACVQTDPKDRLSARELLEHPFIKMYEDTDIDLSSYFNDAGSPLATF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34045737 34048964 + CePI673135_03g015940.1 Cec03g1594 199218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1594 355 Pfam Protein kinase domain 73 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1594 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1594 355 ProSiteProfiles Protein kinase domain profile. 71 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1594 355 SUPERFAMILY Protein kinase-like (PK-like) 55 337 IPR011009 -
Cec03g1594 355 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 17 351 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cec03g1594 355 Gene3D Transferase(Phosphotransferase) domain 1 151 351 - -
Cec03g1594 355 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524(InterPro)
Cec03g1594 355 PRINTS Tyrosine kinase catalytic domain signature 146 159 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1594 355 PRINTS Tyrosine kinase catalytic domain signature 183 201 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1594 355 PRINTS Tyrosine kinase catalytic domain signature 249 271 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1594 355 FunFam Mitogen-activated protein kinase kinase 6 41 150 - -
Cec03g1594 355 CDD PKc_MAPKK_plant_like 69 335 - -
Cec03g1594 355 FunFam Mitogen-activated protein kinase kinase 6 152 350 - -
Cec03g1594 355 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Cec03g1594 355 SMART serkin_6 71 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1594 Cec-Chr3:34045737 Cec07g1538 Cec-Chr7:30964063 3.10E-53 dispersed
Cec09g1113 Cec-Chr9:10912502 Cec03g1594 Cec-Chr3:34045737 8.10E-19 dispersed
Cec03g1594 Cec-Chr3:34045737 Cec03g1597 Cec-Chr3:34064320 1.30E-16 proximal
Cec07g0762 Cec-Chr7:15458882 Cec03g1594 Cec-Chr3:34045737 4.10E-37 transposed
Cec10g1402 Cec-Chr10:28358272 Cec03g1594 Cec-Chr3:34045737 7.90E-64 transposed
Cec11g0214 Cec-Chr11:2311386 Cec03g1594 Cec-Chr3:34045737 3.30E-127 transposed
Cec11g1200 Cec-Chr11:24899978 Cec03g1594 Cec-Chr3:34045737 7.80E-39 transposed
Cec11g0175 Cec-Chr11:1928528 Cec03g1594 Cec-Chr3:34045737 7.30E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71859 PF00069 Pkinase 4.30E-72 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1594 K20603 - csv:101204545 693.73