Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1597 ATGGCGGACCGCGTGAGACAGTGCCACGTGGAAGGCCATTGCAAAAACAGGGGAAGTAATGGAAGGAACGAATCACCATTTCCCACATGTCAGGAGGTTGAAGCCGAGGAAGAAGATGAAGTGGGACCCTCCGCCGTGGAGGAGGAAGAAATTGGATTTGTGGGTTCGAGCTTGACTTTGGAGAAGGTCGCTGCAGCCAAACAGTACATTGAGAATCATTACAAGGCTCAAAAAAAGCACATTGAAGAACGCAAAGAGAGGCGCTCAGTGCTTGAAAGGAAGTTGGCATCTTCAGATGTCTCAGAAGAAGAACAAATTAATCTATTGAAGGATTTGGAGCGCACGGAGACTCAATACATGCGGCTGAAAAGGCATAAAATTTGTGTTGAGGATTTCAACCTTTTGACAATTATTGGGCGAGGTGCTTTTGGGGAGGTCAGACTTTGTCGGGAGAAGAAAACAGGCAACATATATGCCATGAAGAAGCTGAAGAAATCAGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCAGAAGTTGCGAGTCACTGCATTGTGAAACTCTATTATTCCTTCCAAGATGCTGAGTACTTGTATCTGATCATGGAGTATCTTCCAGGAGGTGACATGATGACTTTACTGATAAGGGAGGAAACTTTGACGGAAACTGTAGCTAGATTTTACGTTGCGCAAAGTGTTTTGGCTATAGAGTCAATTCATAAACATAACTACATCCACAGAGACATAAAACCTGATAACCTTCTACTGGACAAAAGGGGTCATATGAAACTCTCTGATTTTGGTCTTTGCAAGCCTCTTGACTGCACAAATCTGTCTGCTATAAATGAAAATGAAGTCCTTGATGATGAAAACTTGCACGATACGGTGGATGTGGATGAGAGCTTTCCAGGTAAAAAAAGTGGGAGACGCTGGAAGAGTCCCCTCGAACAACTTCAGCATTGGCAGATTAACAGAAGGAAACTGGCATTTTCCACGGTTGGCACTCCAGATTATATAGCTCCAGAAGTGTTGCTAAAAAAAGGATACGGTGTGGAATGTGACTGGTGGTCTCTTGGTGCAATAATGTATGAAATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAGTAACAACATGCCGAAAGATTGTGCATTGGAAAAATCACTTAAAATTCCCTGATGAGATAAGATTATCACCTGAAGCAAAAGACATGATCAGTAGGCTGCTTTGCGATGCCGAGAATAGGCTTGGTTCTGGAGGTGCAGACCAAATCAAGGCTCATCCTTGGTTCAAAGATACCGAGTGGGACAAACTCTACGACATGGATGCAGCATTTAAGCCCGAGGTCAATGGGGAACTTGATACGCAGAATTTTATGCAATTTGATGAGGTTGATCCACCGCCAACTAGAACCGGATCTGGACCAATAAGGAAGATGTTGTTGACTCCCAAAGATCTCAGTTTTGTTGGTTATACATACAAAAATTTTGAAGCTGTCAAAGGGCTACACCATTCATTTGATTTGATGTCAAACACCACCCCCATTCGAACTTCGTCTATTGACTCTACTAAAAGTGACTCGGCATTGAATAACTACTCTACCACCTACTCACCAGATGACAGGGAAACCATATTGGCATCATCAGGGGATGCTTTGTCACAGTAA 1692 43.14 MADRVRQCHVEGHCKNRGSNGRNESPFPTCQEVEAEEEDEVGPSAVEEEEIGFVGSSLTLEKVAAAKQYIENHYKAQKKHIEERKERRSVLERKLASSDVSEEEQINLLKDLERTETQYMRLKRHKICVEDFNLLTIIGRGAFGEVRLCREKKTGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTETVARFYVAQSVLAIESIHKHNYIHRDIKPDNLLLDKRGHMKLSDFGLCKPLDCTNLSAINENEVLDDENLHDTVDVDESFPGKKSGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEIRLSPEAKDMISRLLCDAENRLGSGGADQIKAHPWFKDTEWDKLYDMDAAFKPEVNGELDTQNFMQFDEVDPPPTRTGSGPIRKMLLTPKDLSFVGYTYKNFEAVKGLHHSFDLMSNTTPIRTSSIDSTKSDSALNNYSTTYSPDDRETILASSGDALSQ 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34064320 34072352 - CePI673135_03g015970.1 Cec03g1597 199221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1597 563 ProSiteProfiles AGC-kinase C-terminal domain profile. 440 512 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1597 563 Gene3D Transferase(Phosphotransferase) domain 1 216 282 - -
Cec03g1597 563 Gene3D Transferase(Phosphotransferase) domain 1 338 459 - -
Cec03g1597 563 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 508 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cec03g1597 563 FunFam Non-specific serine/threonine protein kinase 338 457 - -
Cec03g1597 563 SMART pkinase_C_6 440 504 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1597 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1597 563 ProSiteProfiles Protein kinase domain profile. 132 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1597 563 CDD STKc_NDR_like 130 503 - -
Cec03g1597 563 FunFam Non-specific serine/threonine protein kinase 216 283 - -
Cec03g1597 563 MobiDBLite consensus disorder prediction 1 46 - -
Cec03g1597 563 Gene3D Phosphorylase Kinase; domain 1 91 215 - -
Cec03g1597 563 Pfam Protein kinase C terminal domain 458 502 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1597 563 MobiDBLite consensus disorder prediction 1 18 - -
Cec03g1597 563 CDD MobB_NDR_LATS-like 66 127 - -
Cec03g1597 563 Pfam Protein kinase domain 332 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1597 563 Pfam Protein kinase domain 133 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1597 563 SUPERFAMILY Protein kinase-like (PK-like) 114 488 IPR011009 -
Cec03g1597 563 FunFam Non-specific serine/threonine protein kinase 458 468 - -
Cec03g1597 563 MobiDBLite consensus disorder prediction 524 563 - -
Cec03g1597 563 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524(InterPro)
Cec03g1597 563 SMART serkin_6 132 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1597 563 MobiDBLite consensus disorder prediction 31 46 - -
Cec03g1597 563 FunFam Non-specific serine/threonine protein kinase 93 215 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1597 Cec-Chr3:34064320 Cec04g2253 Cec-Chr4:40163024 1.30E-178 dispersed
Cec03g1594 Cec-Chr3:34045737 Cec03g1597 Cec-Chr3:34064320 1.30E-16 proximal
Cec01g0523 Cec-Chr1:5345246 Cec03g1597 Cec-Chr3:34064320 1.90E-67 transposed
Cec06g0728 Cec-Chr6:8430571 Cec03g1597 Cec-Chr3:34064320 1.80E-184 transposed
Cec09g0776 Cec-Chr9:7105483 Cec03g1597 Cec-Chr3:34064320 3.00E-183 transposed
Cec03g1597 Cec-Chr3:34064320 Cec05g1987 Cec-Chr5:31886686 7.80E-224 wgd
Cec03g1597 Cec-Chr3:34064320 Cec08g1784 Cec-Chr8:28927488 4.50E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71860 PF00069 Pkinase 5.50E-43 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1597 K08790 - csv:101208238 998.808