Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1616 ATGGAGGAGGTTCTGATTCTTCAGCTGGTGATTCTTTGTCTCTTCATTGCTGTTAATGCTTCCAACCTTGGGGAAATTGCTGGATTCAGCTACTCTACACCCCCTTCAAGTTTTCAAGCATTTCCTCCGGTTTTAGGAACACCTGGTCCAGTCCAACATGAAAAATCGTTGATAATCAATGGACCAAGCTCAGCGCCTCAGCAACATGAGTCAACTTTGCAACCACCAGTTATGTTACCAGCAATTGCTCCAGGTCTGTTGCCTGATACGATCAAAGGGTTTATACCATCCGCTTCACCCCATGCTCCGACCGAGTCGCCACCATTTAATAGTATGCCTCAGCCACCTTTACCAGTTCAACCAAATGCACCATTGATTTCACCAAGTGCACCAGAACCAGAAGGTAAAGCACCAGCGAATGAGACTCCTCTGGCAATGGTTTCTCCAGATCCAGCTGTGTCATCTTCAAATTCGCCACATTATCCTCCAGCAAGTTCCCCGCATGAGCAAACAAATATTTCATCGAGTTCTCATCAAATCACTTCACCAAATGTAGCTCCAATCCCCGAGCCAATTTCCCCAGCGAGCAAGTTGCCCAAGAACTCACCAGCTAGTCATCCGGTAGTTCCTGAAAGACCTCCATCCATATTACCAGAGCCCAATATCTCTCCAATGGTGGCTATTTCCCCAAAAGCTGGTGACAGAAATAGATTAGAAGCACCAGCAGCTACACCTTATAATGCACTGCCCAAGTATATGCCACCTGTGTCTCATTCCCCAGAAGAAGCTCCTTCCGGTCACAATGACATGGGACATTCTCATGACGCCCAACAGCCGATCCTTCCGCCACAAAAAGCTCCGTTTCATAGAGTAAATCGTTCTCCAACATCTCCTCCTTTGCCCTCAAATTATAAGCATCAGAGAAGGAAGAATTATATCATCAGTCACGCACCTGCACCTGCACCTCCACCATCATATCCAATTTCCTCCCCCACGACAAAAACGCCAGGTCCAGTTATATCTACAGCACAACATTCGCCAGGCAGACGACATAATGCTCCACCTCCGGAATCAGAACCTTCGCCAATTTCTCCTTCACAATATGCTCTGCCACCACCGCTTATGACGCATGGTTCGCCTTCTCCTTCACCATACCAAAAAGTAGCTGGGCATGCTAGAAGACATTTTTATCCTCCAAAAGCTTCACCGCTGAAACCTTGGGCAAAAAGCCCGAAGATGCCACCAATTCATACGTTGCCTCCTCCACCTCCCAATGAAGATTGTTTAGCTACCCAGTGCACCGAGCCGTATACAAATACTCCCCCAGGATCTCCCTGCGGTTGTGTTTGGCCCATGCAAATTGGACTTCGCCTCAGTGTTTCGCTATATACCTTCTTCCCTCTGGTTTCAGAGCTGGCAGCGGAAATTGCTGTTGGGGTGTTTGTAAAGCAAAGCCAAGTTCGCATCATTGGAGCCAATGCAGCTAACCAGCAACCAGATAAGACTGTTGTCCTTATTGATTTAGTTCCACTTGGCGAAAAATTTGACAATACTACAGCCTTTTTGACTTACCAAAGGTTTTGGCATAAGAAGGTTTCGATCAAAACTTCCTATTTTGGGAACTATGAAGTATTATATGTTCGATATCCAGGTTTACCTCAATCACCTCCTTCTGGAGATTCAGGACTAGATAATGAGCCTTATTTCAGTAATAGTAATGATGCGAGGACAGTAAAACCAATCGGTGTTGATGTGCAGAACAGACAGCACAAAGATAGGCTAAGTGGTGGTATGATTGCCATCGTTGCCCTATCAACTACTGTTGCAGTGGTCTTATGTGTTGCAACTGCTTGGATTTTGCTCTTCAAACGCAATGATGGCCTTTGTCAGCCAAAACCGACTCCACATGTTTCGTTATCCTCCCTCAATAAACCATCAGGTGCTGGTGGATCAGTCATGGCAACCATGCCTAGTTCAGCATCTTTATCCTTTGGATCTGGCATCGCCCCATATTCAGGGTCAGCCAAGACATTCAGCGCCTCTGACATTGAGAGAGCCACCAATGATTTTGATCCTTCAAGAATATTGGGAGAGGGTGGCTTTGGACGTGTTTACAGAGGCGTTCTCGAAGATGGTACCGAAGTAGCAGTCAAAGTTCTCAAGAGAGATGATCATCAGGGTGGTCAAGAATTCTTGGCTGAAGTTGAAATGCTTAGTCGTCTCCACCATAGAAATTTGGTCAAGTTGATTGGAATATGTACCGAGGAACGTAGCCGCGCCCTGGTGTATGAACTTATTCCAAATGGCAGTGTGGAATCTCACTTGCATGGTGTTGATAAGGAAACTGCCCCACTTGATTGGGCTGCCCGGATCAAGATAGCACTTGGCGCTGCTCGGGGTTTATCCTATCTACATGAGGATTCAAGTCCTAGAGTCATACATCGAGACTTCAAATCCAGCAATATCTTGTTAGAAAATGATTTTACACCAAAGGTTTCTGACTTTGGGTTGGCTAGAACTGCAATGGATGAGGAAAGCAGACACATATCGACACGTGTCATGGGAACTTTCGGGTACGTGGCGCCAGAGTATGCAATGACTGGTCATCTACTTGTGAAGAGTGACGTTTATAGCTACGGGGTCGTTCTTCTTGAGCTATTAACTGGCAGGAAACCAGTAGATATGTCGCAACCGCCTGGTGAAGAAAATCTTGTTGCTTGGGCTCGTCCTCTCCTCACAAGCAAAGAAGGCCTAGATGTTATAATTGACAAATCACTAGATTCTAATATTCCTTTCGAAAATATTGCTAAAGTGGCAGCCATTGCTTCAATGTGTGTGCAACCGGAGGTGTCACATCGACCTTTCATGGGCGAGGTTGTTCAAGCATTGAAACTAGTTTGCAACCAATGCAACAAGGCTCGAGAAACAAGCTCACTGGCTGGTTCAAGCCCAGAGAGTTCAACTATCAATACAAATGATGATGAGACATCAAGCTCAAGATACATGCTAGACTCTTTTCATAGTGAATATTTAATACCTAACTCAATTTCGAGTCTAGATGGCATCTATACACATCTCTCAATTTCAGACCTGTTAAATACTTCAATCGATATCAGAATGCAGGAATCCAGATCACTTGAAAGATGCTTCAGTTCCGATCCTCCTAGAATCGGAAAAGGCAGAAGGCAGTTCTGGCAAAGAATGAGAAGATACTCAGGAAGTAGCAGCATAAGTGAACATGGAATACCTACTAGAATATGGTCAGCTTGGCAGTGCTACATGCAACAACTTGTTGGAATTGTGGAGCAAAAGTTCAATCACTTGATTGATGAATTGGGCCATACAAGAACAGTTGTCCTCTAA 3363 45.17 MEEVLILQLVILCLFIAVNASNLGEIAGFSYSTPPSSFQAFPPVLGTPGPVQHEKSLIINGPSSAPQQHESTLQPPVMLPAIAPGLLPDTIKGFIPSASPHAPTESPPFNSMPQPPLPVQPNAPLISPSAPEPEGKAPANETPLAMVSPDPAVSSSNSPHYPPASSPHEQTNISSSSHQITSPNVAPIPEPISPASKLPKNSPASHPVVPERPPSILPEPNISPMVAISPKAGDRNRLEAPAATPYNALPKYMPPVSHSPEEAPSGHNDMGHSHDAQQPILPPQKAPFHRVNRSPTSPPLPSNYKHQRRKNYIISHAPAPAPPPSYPISSPTTKTPGPVISTAQHSPGRRHNAPPPESEPSPISPSQYALPPPLMTHGSPSPSPYQKVAGHARRHFYPPKASPLKPWAKSPKMPPIHTLPPPPPNEDCLATQCTEPYTNTPPGSPCGCVWPMQIGLRLSVSLYTFFPLVSELAAEIAVGVFVKQSQVRIIGANAANQQPDKTVVLIDLVPLGEKFDNTTAFLTYQRFWHKKVSIKTSYFGNYEVLYVRYPGLPQSPPSGDSGLDNEPYFSNSNDARTVKPIGVDVQNRQHKDRLSGGMIAIVALSTTVAVVLCVATAWILLFKRNDGLCQPKPTPHVSLSSLNKPSGAGGSVMATMPSSASLSFGSGIAPYSGSAKTFSASDIERATNDFDPSRILGEGGFGRVYRGVLEDGTEVAVKVLKRDDHQGGQEFLAEVEMLSRLHHRNLVKLIGICTEERSRALVYELIPNGSVESHLHGVDKETAPLDWAARIKIALGAARGLSYLHEDSSPRVIHRDFKSSNILLENDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGEENLVAWARPLLTSKEGLDVIIDKSLDSNIPFENIAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCNQCNKARETSSLAGSSPESSTINTNDDETSSSRYMLDSFHSEYLIPNSISSLDGIYTHLSISDLLNTSIDIRMQESRSLERCFSSDPPRIGKGRRQFWQRMRRYSGSSSISEHGIPTRIWSAWQCYMQQLVGIVEQKFNHLIDELGHTRTVVL 1120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34311457 34317307 + CePI673135_03g016160.1 Cec03g1616 199240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1616 1120 MobiDBLite consensus disorder prediction 317 331 - -
Cec03g1616 1120 Pfam Protein tyrosine and serine/threonine kinase 694 963 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1616 1120 MobiDBLite consensus disorder prediction 353 379 - -
Cec03g1616 1120 ProSiteProfiles Protein kinase domain profile. 690 966 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1616 1120 Gene3D Phosphorylase Kinase; domain 1 668 765 - -
Cec03g1616 1120 MobiDBLite consensus disorder prediction 976 996 - -
Cec03g1616 1120 MobiDBLite consensus disorder prediction 101 128 - -
Cec03g1616 1120 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1616 1120 MobiDBLite consensus disorder prediction 206 220 - -
Cec03g1616 1120 FunFam Receptor-like serine/threonine-protein kinase ALE2 766 980 - -
Cec03g1616 1120 FunFam receptor-like serine/threonine-protein kinase ALE2 663 765 - -
Cec03g1616 1120 MobiDBLite consensus disorder prediction 93 389 - -
Cec03g1616 1120 MobiDBLite consensus disorder prediction 332 348 - -
Cec03g1616 1120 CDD STKc_IRAK 696 964 - -
Cec03g1616 1120 MobiDBLite consensus disorder prediction 149 186 - -
Cec03g1616 1120 SUPERFAMILY Protein kinase-like (PK-like) 670 963 IPR011009 -
Cec03g1616 1120 Gene3D Transferase(Phosphotransferase) domain 1 766 984 - -
Cec03g1616 1120 PANTHER OS01G0750732 PROTEIN 425 1006 IPR050885 -
Cec03g1616 1120 ProSitePatterns Protein kinases ATP-binding region signature. 696 718 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2236 Cec-Chr2:39793312 Cec03g1616 Cec-Chr3:34311457 4.00E-66 dispersed
Cec03g1616 Cec-Chr3:34311457 Cec07g0185 Cec-Chr7:1885302 3.70E-177 dispersed
Cec02g1155 Cec-Chr2:26923869 Cec03g1616 Cec-Chr3:34311457 4.80E-13 transposed
Cec03g1616 Cec-Chr3:34311457 Cec09g0063 Cec-Chr9:541482 1.00E-206 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71861 PF07714 PK_Tyr_Ser-Thr 1.50E-49 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1616 - - - 0.0