Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1666 ATGGGGAGAGCAACCAGATGGTTCAAGAACTTGTTTGGGATTAAGAGAGACAAAGAACCCACGAGAGAAATTTCCAACGCCGGCATCAACAAGGAAAAAAAACCCGCTTCGAATTTCACCGGCGACGCCGAACTCTGCAACAATCCGGCGACAATACCGCCGAATTTGTCAGCGGCGGAAGCGGCTTGGCTCAAATCCTTCTACTCGGAAACAGAGAAGGAACAGAGCAAACACGCAATAGCAGTAGCTGCAGCCACTGCCGCTGCAGCCGACGCCGCAGTTGCTGCAGCACAAGCCGCCGTGGCAGTGGTCCGGCTAACCAGCCACGGGAGAGGCACCATGTTCGGCGGCGGCCGGGAAAGATGGGCCTCTGTTAAGATTCAAACTTGCTTCAGAGGATATCTGGCGAGGAAAGCACTGAGAGCTTTGAAAGGATTGGTGAAATTACAAGCGCTTGTGAGAGGATATTTAGTTCGTAAACAAGCAACAGCAACTCTTCATAGTATGCAAGCTTTAATCAGAGCTCAAGCCACCATTCGATCTCAGAGAACTCGTAGATTCATAAACGACGAAACAAGACTTGAAATCCGAGCCAGAAAATCAATGGAGAGATTTGATGACACAAAAAGCGAACACACAGCTTCCGTACACAGCAGAAGACTTTCTGCTTCATTAGATAACACAGCATTCACAGCAATGGAAGAAAGCCCCAAAATCGTGGAAATCGACACCGGCCGACCAAAATCCTGGTCACGCCGGACGAACACGTCGGCGTCGGAATTAAGCGACGACCTATTTCACCAAACTCTCTCGTCTCCACTCCCTTGCCGGACTCCGTCGCGTTTGCAAATCCCAGATTGCCGGAATTTCCATGACTCTGACTGGTGCGGCGGCGACGACTGGCGTTTAATCTCGACGGCGCAGAGTACTCCACGATTTGTAAGCTCTGGCGGTGGATCGAACGGTCCTCCGACGCCGGCGAAGAGTATTTGTGGGGAGAATTTCATTAAAGGGTACTTGAATTTTCCAAATTACATGGCGAATACTCAATCGTTTAAGGCGAAATTGAGATCTCAGAGTGCACCGAAACAGAGGCCGGAGCTGGGATCGAAGAAAAGGGTTTCGTTGAATGAATTGATGGAATCGAGAAGCAGTCTTAGTGGAGTTAGAATGCAGAGATCTTGTTCTCAAGTTCAAGAAGCCATTAATTTCAAGAACGCAGTGATGAGCAAACTCGATAGGCCATCAGAATTCAACAATTTGCAGAGAAGAATATGA 1278 48.98 MGRATRWFKNLFGIKRDKEPTREISNAGINKEKKPASNFTGDAELCNNPATIPPNLSAAEAAWLKSFYSETEKEQSKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRGTMFGGGRERWASVKIQTCFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATIRSQRTRRFINDETRLEIRARKSMERFDDTKSEHTASVHSRRLSASLDNTAFTAMEESPKIVEIDTGRPKSWSRRTNTSASELSDDLFHQTLSSPLPCRTPSRLQIPDCRNFHDSDWCGGDDWRLISTAQSTPRFVSSGGGSNGPPTPAKSICGENFIKGYLNFPNYMANTQSFKAKLRSQSAPKQRPELGSKKRVSLNELMESRSSLSGVRMQRSCSQVQEAINFKNAVMSKLDRPSEFNNLQRRI 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 34853316 34854773 - CePI673135_03g016660.1 Cec03g1666 199290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1666 425 ProSiteProfiles IQ motif profile. 144 171 - -
Cec03g1666 425 SMART iq_5 119 141 IPR000048 GO:0005515(InterPro)
Cec03g1666 425 SMART iq_5 142 163 IPR000048 GO:0005515(InterPro)
Cec03g1666 425 Pfam IQ calmodulin-binding motif 121 141 IPR000048 GO:0005515(InterPro)
Cec03g1666 425 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515(InterPro)
Cec03g1666 425 Pfam Protein of unknown function (DUF4005) 322 388 IPR025064 -
Cec03g1666 425 Gene3D - 117 171 - -
Cec03g1666 425 PANTHER IQ-DOMAIN 5-RELATED 6 393 - -
Cec03g1666 425 ProSiteProfiles IQ motif profile. 120 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1666 Cec-Chr3:34853316 Cec09g0022 Cec-Chr9:231277 4.10E-84 dispersed
Cec02g1727 Cec-Chr2:35039068 Cec03g1666 Cec-Chr3:34853316 4.30E-09 wgd
Cec03g1666 Cec-Chr3:34853316 Cec07g1451 Cec-Chr7:30162977 8.30E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1666 - - - 0.0