Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1681 ATGGATCCTCGCAACGACGCCGTTTTCCCCGACGAAGACCTCGAGGACGACGAGGAATCCCTCGACGACGAAGACGACGACGAAGAGGAGGAGGAATTGAACGACGATCCTTCTCCTTCCACTTCCTCCGCCGGCGCCGTTCCTGTCCCTTCCGTCTCCGCTACCGTCACCGTCGCCACTCCTGCCGTCTCCGTTGTTCCTCCTCCTTCGATTGTTTCAATCTCCTCTGCCGATCTGATACGCCAGCGCCTCGAGACCGCCACCGCCGAGCCTTTGACCTTGCAGGGGGAGAAGAAGCCCTTGGATGAGTCCAGGAAGTTGTTTCAACGCCTTTGGACCGATGAGGATGAGATCGAGCTTTTGCAGGGGTTTTTGGACTACACGATGCAGCGTGGTACGACTCATCATCATCAGAACGATACGGCGTTGTTTTACGACCAGATCAAGTCGAAATTACAGCTGGATTTTAACAAGAATCAGCTCGTTGAGAAGCTTCGGAGGTTGAAGAAGAAATATCGCAACGTTATTGGTAAGATTAGCTCTGGTAAAGACTTCAATTTCAAAAGCCCTCACGATCAGGCTACGTTTGAGATTTCTCGCAAGATCTGGAGCAATACCGGTCGAATTGGAGTCGACGACAACGCTTTAGACGATGACGAAACTGCTGCTCCGACTCCATATGCTAGCTACATGGACCACAGAAACGAAGAGATGATGGCGAATTGCGCAGAGAAGAAACCGACGCCGACTCCGAAATCGCGGAAGCGTACACGGCCTGGATCGGGAATTAGAATGGACGTTCCGCGTTCGTCTAATGAGAATTTGAGTAAAGAGAAAAACAGTACCTACCACAACAACACCAACAACAACGAAAATGTCAATAACGTAGCGGTAGCAGGATTGATCGAGGAGACGGTGAGGACCTGCCTGTCGCCATTGTTTAAGGAATTGCTGAATACTTCCATGGGAGGAGGGCTCTGTGGTGGAGGCAGAGGGTTTAGTGGATTGGCTTTGCATCCGATTCCATTGAGCTTCGGTGGTGCTTCCATCAATTTCGGAGGCGGAGGTGAAATTGCGGATGAGAGGTGGAGGAAGCAGCAGATTTTGGAACTGGAAGTTTATTCGAAGAGGTTGGAGTTGGTTCAAGAACAAATTAAGACGGCATTAGAAGACTTGAGGTCCATGGGAGGCTGA 1194 50.84 MDPRNDAVFPDEDLEDDEESLDDEDDDEEEEELNDDPSPSTSSAGAVPVPSVSATVTVATPAVSVVPPPSIVSISSADLIRQRLETATAEPLTLQGEKKPLDESRKLFQRLWTDEDEIELLQGFLDYTMQRGTTHHHQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKDFNFKSPHDQATFEISRKIWSNTGRIGVDDNALDDDETAAPTPYASYMDHRNEEMMANCAEKKPTPTPKSRKRTRPGSGIRMDVPRSSNENLSKEKNSTYHNNTNNNENVNNVAVAGLIEETVRTCLSPLFKELLNTSMGGGLCGGGRGFSGLALHPIPLSFGGASINFGGGGEIADERWRKQQILELEVYSKRLELVQEQIKTALEDLRSMGG 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35023278 35024471 + CePI673135_03g016810.1 Cec03g1681 199305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1681 397 MobiDBLite consensus disorder prediction 267 291 - -
Cec03g1681 397 MobiDBLite consensus disorder prediction 1 49 - -
Cec03g1681 397 Pfam Glabrous-enhancer-binding protein-like family, DBD domain 108 204 IPR053932 -
Cec03g1681 397 Coils Coil 14 34 - -
Cec03g1681 397 MobiDBLite consensus disorder prediction 9 36 - -
Cec03g1681 397 Coils Coil 158 178 - -
Cec03g1681 397 MobiDBLite consensus disorder prediction 242 291 - -
Cec03g1681 397 Coils Coil 371 391 - -
Cec03g1681 397 PANTHER BNAANNG10740D PROTEIN-RELATED 15 394 IPR007592 GO:0005634(PANTHER)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0174 Cec-Chr2:1690689 Cec03g1681 Cec-Chr3:35023278 1.40E-17 dispersed
Cec03g1681 Cec-Chr3:35023278 Cec04g1941 Cec-Chr4:37746813 3.40E-24 dispersed
Cec02g1717 Cec-Chr2:34905207 Cec03g1681 Cec-Chr3:35023278 3.50E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29256 PF04504 DUF573 1.40E-34 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1681 - - - 0.0