Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1693 ATGGTTGTTCCTTTACCTAGGCAGATCGAATACACTGCTGCGTTGGCGGGTTGTGATTGGGCCGTAACGGTCAGTGTGGGAAACAGTCAGCACAGCAATCACGAGCCGAATCGGACCAACGAGAATCCGTCGCCTGTAGCCGCGTCGTCCTCACCATGTGTTTCTGATAATCGTCCTGCAACTGCTCCGGGTCAGACTTCCGGCAACTCTCCGTCCAGTCCTTCATCGTCGCCATCGCTGGCAACAACTCCTCCAGGGGGTGGAAGCGTTACTCCGGTTTCGGTGCCTCCCAATCGCTCCGATTACTTTTCTTCAGAGGAGGAGTTTCAGGTTCAGCTTGCCCTAGCTATTAGCGCCTCGAATTCGGACTTCCGGGATGATCCGGAGAAGGATCAAATTCGAGCTGCGACCCTTTTGAGCTTAGGAAATCATCGGATTGATTCCACTGCCAGGGACCAGGGAGATGCTGCTGAGGTGCTCTCGAGACAATATTGGGAATACAATCTGCTTGACTATGAAGAAAAAGTGGTCAATGGGTTTTATGATGTCCTTTCTACGGATTCGGCAGTCCAAGGAAAAATTCCATCTCTATCTGATATTGAAGCAAGCTTTGGTAGTTCTGGCTTTGAGGTCGTGATGGTCAATATGACTGTTGATCCTGCACTAGAAGAGCTAGTGCAAATTGCTCAATGTATTGCAGATTGCCCTGGCACTGAGGTCAGGGTTTTGGTTCAGAGGCTTGCTGAGCTTGTTATGGGACATATGGGGGGACCTGTAAAGGATGCCCATTTTATGCTAGCAAGGTGGATGGAAAGAAGCACAGAGTTAAGGACTTCTCTTCACACCAGTGTATTGCCTATTGGTTCCATTAATATTGGCCTCTCAAGACATCGTGCGTTACTTTTCAAGGTGTTAGCTGACAGTATCAAGATGCCTTGTAGGCTTGTTAAAGGTAGTCACTATACTGGTGTTGAAGAAGATGCTGTCAACATTGTAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTAATGGCAGCTCCTGGAACACTTCTACCGGCAGACACATTTAGTGCGAAGGACACTACTAACTTTAATACGTACAACCCCAAAGTAAGCAAAATTCCTTCTCTTCGCCACTCCAATGATGTTGGAATTTCTTCTGCAAAACCAACATCAGCACTTGAGGAAGGCAGCAGTCAGAACTTTGAAGCGGAGGCCATCTCACTGGTGGATGGGAAACTGAGCTATGGAAGGACAGAGTCTGTGCCGTCCAGCTCAGGTACTGGAACTTCTCGATGCAAGGGAGCCCATTTTGGTGAGGGTAATGCTAGACTGAATGTCAATGTAGTTCCATTTGGTCAAAGCTCCGAGGATTCCAAAAATCTTTTTGCGGATCTTAATCCTTTCCAAATAAAAGGAACTGGAAAAAGTTTCATTCCTAACAAATCCTCTGATAATAAAATTGAGGAGCTCCAGAAACCGAATATTGGGCATCCTCCTGTACCATTATGGAAAAATCGGGTTGCTTTCAATGCAGTTCCCAATAAAAATGAGTACGATTATATGGAGGGTCGTTTTCCAAGAGTTAGTCGCCGACCTAATGATCATAATATGGCATTGTCTTCTTCTTCCAACTCTACTGTCTCTGAAAATGTCAATCCTGGTGGTTCAGGAACATCTACCGACTTGTGTGTATCAATTAGAAGTGCTGAAGTTGGAAGTTCTTCATCTAATATGAACTCACGGCCGACATCTGCAATAATTAAACCTAATATTTTGCCTTTAATTGACGAACAGAACAGAAAGTCCGATGGAGAACATTCTGGAAATACAGACATGGAGGATGAAAAGGTAGATGCTATTGATGGACGCGATAATTTAATCAGATTTGATAGCCGTAGAAAGTTCACATATGATAGATCTGTTGGGACCAATTTGATATTGAAGGATCCGGGAAGTCCCAGCCTGTTGGTCAATCCAAGTTCGAATAGGTTTGAGCAAGTTTATGACGATGTGGATGTAGGTCAATGTGAAATCCAATGGGAGGACCTCATTATTGGTGAAAGGATTGGACTAGGTTCGTATGGAGAAGTCTACCATGCTGATTGGCATGGCACGGAGGTTGCTGTGAAGAAATTCTTAGACCAGGATTTTTCTGGCGCTGCTTTAGCTGAGTTCAAAAGAGAAGTACTGATAATGCGGCAGCTGCGTCATCCGAATATTGTTCTCTTTATGGGTGCTGTCACTCGTCCTCCCAACCTTTCCATTGTTACTGAGTTTCTTCCAAGAGGAAGCTTGTACCGGATCATTCACCGCCCACATTGTCAAATTGATGAAAAGCGCAGAATAAAAATGGCCCTTGATGTGGCAAGGGGCATGAATTGCTTGCATACAAGTACTCCAACAATTGTTCACCGAGATCTGAAATCACCGAATCTTTTGGTTGATAAGAACTGGAATGTGAAGGTATCAGATTTTGGGTTGTCACGCCTGAAGCACAATACGTTTTTATCATCCAAATCAACTGGAGGAACGCCTGAGTGGATGGCACCAGAAGTCCTTCGGAACGAGCCTTCGAATGAGAAATTGCATTCTAGGTCGACGGTTAATTGTAGAATGGGAGGTATTTTCCTAAAGCTTGTCAACAACAGTGGAAACAGGACAACCTGGATGCGCAAGTGCGACGTTTATAGCTTTGGAATAATTCTATGGGAACTTGCTACATTGAGACTGCCTTGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCAGTAGGTTTCCAGAATCGACGACTCGAAATACCCAAGGAAGTGGATCCCACGGTTGCAAGGATAATCTGGGAATGCTGGCAAACCGATCCGAACTTGCGCCCCTCATTCTCACAATTAGCCAATATTCTGAAGCCACTGCAGCGGCTCGTCCTGCCACCACATTCAGACCAGCCAAGTTCGTCGGTGCTGCAAGAGATTTCTTCTGCCTACTATTGGTTTGCCGTCGAAAATGAGACTTTGTTTGCCTCTTTCACCCTTTTACCCTCCAATAAAGAATGTGAATTGAATGGCACTTTTCGTTTCCAATTTGACCCTTTCGAGTGCAACAATTTTGCATTAGGAAAATCCCATTTCTCCTGA 3135 45.1 MVVPLPRQIEYTAALAGCDWAVTVSVGNSQHSNHEPNRTNENPSPVAASSSPCVSDNRPATAPGQTSGNSPSSPSSSPSLATTPPGGGSVTPVSVPPNRSDYFSSEEEFQVQLALAISASNSDFRDDPEKDQIRAATLLSLGNHRIDSTARDQGDAAEVLSRQYWEYNLLDYEEKVVNGFYDVLSTDSAVQGKIPSLSDIEASFGSSGFEVVMVNMTVDPALEELVQIAQCIADCPGTEVRVLVQRLAELVMGHMGGPVKDAHFMLARWMERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLADSIKMPCRLVKGSHYTGVEEDAVNIVKLEDEREFLVDLMAAPGTLLPADTFSAKDTTNFNTYNPKVSKIPSLRHSNDVGISSAKPTSALEEGSSQNFEAEAISLVDGKLSYGRTESVPSSSGTGTSRCKGAHFGEGNARLNVNVVPFGQSSEDSKNLFADLNPFQIKGTGKSFIPNKSSDNKIEELQKPNIGHPPVPLWKNRVAFNAVPNKNEYDYMEGRFPRVSRRPNDHNMALSSSSNSTVSENVNPGGSGTSTDLCVSIRSAEVGSSSSNMNSRPTSAIIKPNILPLIDEQNRKSDGEHSGNTDMEDEKVDAIDGRDNLIRFDSRRKFTYDRSVGTNLILKDPGSPSLLVNPSSNRFEQVYDDVDVGQCEIQWEDLIIGERIGLGSYGEVYHADWHGTEVAVKKFLDQDFSGAALAEFKREVLIMRQLRHPNIVLFMGAVTRPPNLSIVTEFLPRGSLYRIIHRPHCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVSDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKLHSRSTVNCRMGGIFLKLVNNSGNRTTWMRKCDVYSFGIILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPTVARIIWECWQTDPNLRPSFSQLANILKPLQRLVLPPHSDQPSSSVLQEISSAYYWFAVENETLFASFTLLPSNKECELNGTFRFQFDPFECNNFALGKSHFS 1044
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35160291 35173714 + CePI673135_03g016930.1 Cec03g1693 199317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1693 1044 CDD STKc_MAP3K-like 691 968 - -
Cec03g1693 1044 ProSiteProfiles Protein kinase domain profile. 685 972 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1693 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1693 1044 ProSitePatterns Protein kinases ATP-binding region signature. 691 713 IPR017441 GO:0005524(InterPro)
Cec03g1693 1044 FunFam Serine/threonine-protein kinase isoform 1 676 763 - -
Cec03g1693 1044 Pfam Protein tyrosine and serine/threonine kinase 687 859 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1693 1044 Pfam Protein tyrosine and serine/threonine kinase 891 967 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1693 1044 Gene3D Phosphorylase Kinase; domain 1 678 762 - -
Cec03g1693 1044 MobiDBLite consensus disorder prediction 540 563 - -
Cec03g1693 1044 SMART serkin_6 685 971 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1693 1044 Gene3D Transferase(Phosphotransferase) domain 1 764 975 - -
Cec03g1693 1044 Pfam Ethylene-responsive protein kinase Le-CTR1 157 351 - -
Cec03g1693 1044 PANTHER SERINE-THREONINE PROTEIN KINASE 84 969 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec03g1693 1044 MobiDBLite consensus disorder prediction 29 101 - -
Cec03g1693 1044 SUPERFAMILY Protein kinase-like (PK-like) 663 967 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1693 Cec-Chr3:35160291 Cec05g1963 Cec-Chr5:31680992 9.10E-186 dispersed
Cec03g1693 Cec-Chr3:35160291 Cec01g1612 Cec-Chr1:30762998 9.10E-170 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71865 PF14381 EDR1 8.00E-72 CL0125 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1693 - - - 0.0