Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec03g1702 | ATGGCCGGAATCCCCTCTGAGGGGTTGGGGGATGATTTTTTCGAGCAGATTCTGGCGGTGCCGCCGTCTTACGGCGGCGCAGGTGGCGGTGATATGGTGTCTATGCCTATGGGACTACAACTTGGGTCCGGCGGCGGCGGCGGAGGAATGGGTATGCCTTTGGGATTGAATTTAGAACAGGGGTTTTTGAGACAAGAGAGATACAGAGAAGAGCTTGATGGCCACATTAATAATACCACTAATAATGCTTCTTCTTCCTCAACTGCTTCTTCAGGAATCAATGAGAGAGATTCTTCGATGCAGCACATGACAAACTTGTTTCCAACCTTTGGACATTTGCAGACTCAACAACTCCGCCCACCGCCACCGTTACATCTCCACCAGCCTTTTCACAATCAAACAACTCCCATGACGGTTTCTGCTGTACCACAACCACCTCAAGTTCGACCAAGAGTTCGAGCAAGACGAGGGCAAGCGACCGATCCTCACAGTATTGCAGAAAGGTTGCGTCGAGAAAGAATTGCAGAAAGAATGAAGGCCTTGCAGGAGTTAGTTCCTAGTTGCAATAAGACTGATCGAGCGGCAATGCTCGATGAAATTGTTGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTTTTAAGCATGAGTAGACTAGGCGGGGCAGGTGCGGTGGCTCAACTTGTGGCCGATGTGCCCCTATCGTCAGTCGAGGGAGAAGGCATTGAGAGTGGCAACAATCAGCAAGCATGGGAAAAGTGGTCAAGTGATGGAACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGATGTGGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATTATGCCTATCTCATTAGCCTCAGCAATTTTCAGGACACACCAAGCAGACCCACAAATCTTAGTCAAGCCAGAAATGAACACTCCCTAG | 942 | 48.3 | MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGMGMPLGLNLEQGFLRQERYREELDGHINNTTNNASSSSTASSGINERDSSMQHMTNLFPTFGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQADPQILVKPEMNTP | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 35268284 | 35275518 | - | CePI673135_03g017020.1 | Cec03g1702 | 199326 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec03g1702 | 313 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 158 | 207 | IPR011598 | GO:0046983(InterPro) | |
Cec03g1702 | 313 | FunFam | Basic helix-loop-helix transcription factor | 153 | 215 | - | - | |
Cec03g1702 | 313 | MobiDBLite | consensus disorder prediction | 75 | 95 | - | - | |
Cec03g1702 | 313 | Pfam | Helix-loop-helix DNA-binding domain | 163 | 208 | IPR011598 | GO:0046983(InterPro) | |
Cec03g1702 | 313 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 156 | 217 | IPR036638 | GO:0046983(InterPro) | |
Cec03g1702 | 313 | Gene3D | - | 151 | 208 | IPR036638 | GO:0046983(InterPro) | |
Cec03g1702 | 313 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 77 | 292 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Cec03g1702 | 313 | SMART | finulus | 164 | 213 | IPR011598 | GO:0046983(InterPro) | |
Cec03g1702 | 313 | MobiDBLite | consensus disorder prediction | 137 | 162 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec03g1702 | Cec-Chr3:35268284 | Cec09g0720 | Cec-Chr9:6507935 | 2.80E-74 | dispersed | |
Cec03g1702 | Cec-Chr3:35268284 | Cec02g1786 | Cec-Chr2:35711070 | 4.40E-43 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29258 | PF00010 | HLH | 6.80E-08 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec03g1702 | - | - | - | 0.0 |