Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1742 ATGGATGTTACCAACAATTCAAGAGCACCACCACCACCACCAAAAAACCACTTCCATAACCACAACAATTCCAAATTCCACCAACATTACCACAACCACAATGCCATTCTCAGCTCAAATTCCTTCCTCATTATCATTGCCTCAATCATCTCCATCACCATTCTCCTTGCCATCTTCTTCCTCATCTTCATGCTTCTCCGCCTCAAATCCGCTCGAAACACCGCCACTGCCACCGCCTCCACCGCCGCACAATCCACCACATTCATCCCTCACACAACCATCAATTTTGACTCAAGCCCAGAAGTGAAGGGGGTTGGGTGCTTATATGGAGGCAATTCTGGGAGAATTCCTCAGTATAGAATCAGGGGAGTTCAAGTTTTCACTTATAAGGAACTGGAATTGGCTACTGACAATTTTAATGAAGCAAATGTGATTGGAAATGGAAGATTAGGGTTTGTGTACAGAGGAGTTCTTGCAGATGGAGCTGTGGTTGCCATTAAAATGCTTCACAGAGATGGCAAGCAGAGGGAACGTGCTTTCAGAATGGAGGTAGATCTCCTAAGCCGCTTGCACTCTCCTTGTTTGGTGGAGTTGCTTGGCTACTGTGCTGACCAACACCATAGGCTTCTGATATTTGAATTTATGCACAATGGTACTCTTCATCATCATCTACATAATCCCAACAGTGAATCTCGGCCATTGGATTGGAAAACTAGAATGAGGATAGCCCTTGATTGTGCCAAGGCACTTGAGTTCCTCCATGAGCATGCAGTTCCATCTGTTATTCATAGAAACTTCAAGTGCACCAATGTTCTACTGGATCAGGATTTCCGAGCCAAGGTGTCGGATTTTGGTTCGGCCAAGATGGGCTCTGACAAGATCAATGGTCAGATATCTACACAAGTCCTGGGAACCACAGGATATCTAGCACCAGAGTATGCTTCAACAGGAAAACTTACAACAAAGTCAGATGTGTACAGCTATGGTGTTGTGCTGCTTGAGCTATTGACCGGTCGAGTGCCGGTCGATATCAAACGGCCGCAGGGCGAGCATGTTCTTGTCTCATGGGCTCTCCCAAGGCTGACTAATAGAGAAAAAGTAGAGAAAATGATTGACCCAGCTATTCAAGGGAAGTACTCAAAAAAGGATCTAATTCAGGTAGCAGCCATTGCAGCCATGTGTGTGCAGCCTGAAGCCGACTACCGGCCTTTGATGACCGACGTTGTGCAGTCACTGGTTCCTCTAGTTAAGAACCCATCATCGTCGTCTCGATTCTTCAATTGA 1284 45.95 MDVTNNSRAPPPPPKNHFHNHNNSKFHQHYHNHNAILSSNSFLIIIASIISITILLAIFFLIFMLLRLKSARNTATATASTAAQSTTFIPHTTINFDSSPEVKGVGCLYGGNSGRIPQYRIRGVQVFTYKELELATDNFNEANVIGNGRLGFVYRGVLADGAVVAIKMLHRDGKQRERAFRMEVDLLSRLHSPCLVELLGYCADQHHRLLIFEFMHNGTLHHHLHNPNSESRPLDWKTRMRIALDCAKALEFLHEHAVPSVIHRNFKCTNVLLDQDFRAKVSDFGSAKMGSDKINGQISTQVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPQGEHVLVSWALPRLTNREKVEKMIDPAIQGKYSKKDLIQVAAIAAMCVQPEADYRPLMTDVVQSLVPLVKNPSSSSRFFN 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35726938 35729996 - CePI673135_03g017420.1 Cec03g1742 199366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1742 427 PANTHER OS01G0750732 PROTEIN 9 417 IPR050885 -
Cec03g1742 427 FunFam Receptor-like serine/threonine-protein kinase ALE2 215 426 - -
Cec03g1742 427 Gene3D Transferase(Phosphotransferase) domain 1 215 424 - -
Cec03g1742 427 MobiDBLite consensus disorder prediction 1 24 - -
Cec03g1742 427 ProSiteProfiles Protein kinase domain profile. 139 416 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec03g1742 427 Pfam Protein tyrosine and serine/threonine kinase 143 412 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec03g1742 427 SUPERFAMILY Protein kinase-like (PK-like) 117 412 IPR011009 -
Cec03g1742 427 CDD STKc_IRAK 145 415 - -
Cec03g1742 427 FunFam Somatic embryogenesis receptor kinase 1 112 214 - -
Cec03g1742 427 Gene3D Phosphorylase Kinase; domain 1 112 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1742 Cec-Chr3:35726938 Cec07g0310 Cec-Chr7:3031882 8.50E-114 dispersed
Cec03g1738 Cec-Chr3:35649068 Cec03g1742 Cec-Chr3:35726938 3.10E-43 proximal
Cec03g1742 Cec-Chr3:35726938 Cec05g0694 Cec-Chr5:5685097 1.20E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71870 PF07714 PK_Tyr_Ser-Thr 6.20E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1742 - - - 0.0