Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1767 ATGGGCTGTGTTGTGAAATGCGTTTTCATGATTGTTATCTTCATTTCGATGCCTTTTTCATCGCAGAACTCCCACGTTTTGATTGCTAACTCATTGTTGAATACAGCAGAGAGCTTCAATGTTAAAGAGCTAGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATGAACCTTTCATTCTGGAGAGAGTCAGAGCTCTGCTTGGACTCAAGAGTTTACAATTGGGAAATCAAAGCCCATCAGATCTTTCACCTTTGCCGTCGCCATTGCCGTCTCCATCACCAGCCGCCATTGCTCCTTCTCCTGTTCCTATGGCAGCTCATCGAGTGCACATTCATGAACATTCCCACCCTCATCAACTCCGCTTGCACAAGAGCCGACCAGTATACAAACCTAAAAGAAAAGAAGATCCAAAAGAAGGCAGAGTCAGAAAAATTCTTGTCGCAGTTCTTGTGTCTGCAGGAGTCACCATTTTGATATGCTCTATTATTGCCTTTTGGGTCTGCAAGAAGTTCAAAAGTCAGAGAGAGGAATCCATGGAGAAGCATTCTGTTAAGAGTGAAAGAGAAGAGAAGACAGGAAGACCAAAATCTGGCCTTGATCTGTTCGATCTCGGTATGCTTGGAATGGATGTAGAAGAACAGACCCATACTTCTGTAAGTGAAAAGGAGTTATCTGTTCATAAAGAGGGGGAAAGGGACCAAGAGACGTTGGATTCAGAATCTGATAATGTAAGTGTTTCTTCAAGCAAGGAAATGATGTATGTTCATGAGGAAGATGATAGTAAATCAATACAATGCGTATCTGATGGAACTCATTCCTCACCTGGGGATAGAGTTACTCCTGTTAAATGTTGTTCGTCTGATGATGAGGAATCATTCCATTCTTGTGGTGACTCCAATTTGTTGAATGCTCGCCTTTCAAATGCTTCCGGATCTTCTTCTGCGAATGTGATAACAAATTCTACTCGTTCTGTGCCAACTGTGAACTTATCAAGTAAATTGGAAATACAATGTGATGAATCTAACAAACTATTAACTTCTGACCATTCGCATCTTACCCTTTCTCCTTGTAGTTCAGAACCCAAAATGAAGATGGTTTCCCATTCTGTAGGTTGCCAAAAGAATGTCCCATCTTTATCTCCACCTCCTCCACCACCACCGCCACCACCGCCTCCGCCAGTCACTGATCGCAGTTCATTTTCCTTCTCTTCACCCTTTTCAACTGGATCTACTTCCTCTTCTGCATTGTTAAGATCCTCATCTCCTGCAATGTCATATTCTTCTTCGTTATCTCAAATACCATGGAATGATTTACCATCACCTCAAACTGCTACTAAACCTTCACTACCATCATCTGCTATTCCTCCACCCCCTTCTCCACCTCCAAGTTTGAAAACAAACGCTTACTCTTTCAAAACTCCACCTCCTCCTCCTTCCAAGCTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATTTGCGGCCAAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTACACCAGATCAATCAATGGTGTGGGACAAGCTAAGATGGAGCTCATTTGAGCTAGATGAAGAAATGATTGAATCACTATTTGGCTACAACCAACATGATTCAATGAAGAATGGTGATGCTAGCAACAAAAGCCCTTCTCCAAGCAAACATATACTAGAGGCAAAAAGACTTCAGAACCTAACCATTCTCTTAAAAGCCCTGAATCTCTCTACAGAACAAGTTTGTGAAGCCATAGAACAAGGTAGTGGGTTGCGTTTGAGACAACTTGAAGCACTGGTTAAGATGGTACCAACTCAAGAAGAAGAAGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATTAGGTTGTACAGAGAAGTTTGTCATAGCAATTCTGAGAATAACATTCGCCTTCCAAAGAATAGAAGCCATGCTTTACAGAGAAACTTTTGAAGATGAAGTGAACCATCTACGGAATTCATTTTCCATACTAGAGGAAGCCTGCAAGGAACTAAGATCCAGCAGACTCTTCCTGAAACTACTAGAAGCCGTGCTAAAAACAGGGAATCGAATGAACGTCGGAACAAGCAGAGGAGGCGCTAGAGCATTTAAACTAGACGCCCTCCTAAAGCTCTCCGACGTCAAAGGAACCGACGGCAAAACATCTCTACTCCACTTCGTGGTACAAGAAATAATCCGGTCTGAAGGAATCAGAGTATCGGGTAGCATAATGGGAAAAATCAACCAAAAAAACAAATCAAGAACAATGGAAGAAAGAGAAAACGATTACCGAAGAATGGGGTTAGATCTGGTATCGGGGTTGAGCACGGAACTGCAGAACGTGAAGCGAGCGGCGACGATCGATCTGAAAGTAGTTGGAAGCTCGAGGGGAAATCTGAATGAGGGAATGGGGAAAATGGAGAAACTGGTGGGGAAGGAGTTGAGTGTGGATGAAAGGAGTGGGAATTTCGTGGAAGCCATGAAAGGGTTTGTGGGCTATGTGAAGAAGAGGATGGAGGAAGTGAGGAAGGATGAAGAAAGGGTAATGTCGAGTGTGAGAGAGATTACAGAGTACTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCGTTGAGGATTTTTGTGATTGTGAGAGATTTTCTTGGAATGTTGGACAACGTCTGTAAGAGCTTCAAGATTGGAAGTTGA 2694 42.91 MGCVVKCVFMIVIFISMPFSSQNSHVLIANSLLNTAESFNVKELERVSGEDESGGNEPFILERVRALLGLKSLQLGNQSPSDLSPLPSPLPSPSPAAIAPSPVPMAAHRVHIHEHSHPHQLRLHKSRPVYKPKRKEDPKEGRVRKILVAVLVSAGVTILICSIIAFWVCKKFKSQREESMEKHSVKSEREEKTGRPKSGLDLFDLGMLGMDVEEQTHTSVSEKELSVHKEGERDQETLDSESDNVSVSSSKEMMYVHEEDDSKSIQCVSDGTHSSPGDRVTPVKCCSSDDEESFHSCGDSNLLNARLSNASGSSSANVITNSTRSVPTVNLSSKLEIQCDESNKLLTSDHSHLTLSPCSSEPKMKMVSHSVGCQKNVPSLSPPPPPPPPPPPPPVTDRSSFSFSSPFSTGSTSSSALLRSSSPAMSYSSSLSQIPWNDLPSPQTATKPSLPSSAIPPPPSPPPSLKTNAYSFKTPPPPPSKLPQFMAFGKEGNLRPKLKPLHWDKVRATPDQSMVWDKLRWSSFELDEEMIESLFGYNQHDSMKNGDASNKSPSPSKHILEAKRLQNLTILLKALNLSTEQVCEAIEQGSGLRLRQLEALVKMVPTQEEEAKLLSYEGDIGELGCTEKFVIAILRITFAFQRIEAMLYRETFEDEVNHLRNSFSILEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGARAFKLDALLKLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKINQKNKSRTMEERENDYRRMGLDLVSGLSTELQNVKRAATIDLKVVGSSRGNLNEGMGKMEKLVGKELSVDERSGNFVEAMKGFVGYVKKRMEEVRKDEERVMSSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 35954173 35957263 - CePI673135_03g017670.1 Cec03g1767 199391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1767 897 MobiDBLite consensus disorder prediction 178 198 - -
Cec03g1767 897 Coils Coil 649 669 - -
Cec03g1767 897 MobiDBLite consensus disorder prediction 114 129 - -
Cec03g1767 897 SUPERFAMILY Formin homology 2 domain (FH2 domain) 501 891 - -
Cec03g1767 897 SMART it6_source 488 895 IPR015425 -
Cec03g1767 897 MobiDBLite consensus disorder prediction 178 200 - -
Cec03g1767 897 Pfam Formin Homology 2 Domain 493 886 IPR015425 -
Cec03g1767 897 MobiDBLite consensus disorder prediction 357 480 - -
Cec03g1767 897 MobiDBLite consensus disorder prediction 79 101 - -
Cec03g1767 897 PANTHER FORMIN-RELATED 65 893 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cec03g1767 897 MobiDBLite consensus disorder prediction 114 138 - -
Cec03g1767 897 MobiDBLite consensus disorder prediction 398 450 - -
Cec03g1767 897 MobiDBLite consensus disorder prediction 215 281 - -
Cec03g1767 897 ProSiteProfiles Formin homology-2 (FH2) domain profile. 488 897 IPR015425 -
Cec03g1767 897 MobiDBLite consensus disorder prediction 451 465 - -
Cec03g1767 897 MobiDBLite consensus disorder prediction 84 100 - -
Cec03g1767 897 MobiDBLite consensus disorder prediction 216 240 - -
Cec03g1767 897 MobiDBLite consensus disorder prediction 378 397 - -
Cec03g1767 897 Gene3D Formin, FH2 domain 487 894 IPR042201 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1767 Cec-Chr3:35954173 Cec11g0101 Cec-Chr11:1230218 6.80E-105 dispersed
Cec03g1767 Cec-Chr3:35954173 Cec05g1657 Cec-Chr5:27272658 7.30E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1767 K28090 - csv:101208374 1410.97