Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1797 ATGGATTATAGAGATGATGATTCTCAGAACAAGAAAAGATACGCCATCATCGGTGTCTCGTCCATGTTACTAGTGGCGATGGTGGTGGCGGTGACTGTTGGCGTTAACCTAAACCAAGATGAAACGAGCGAACCGGCTACCGGAAACAAAGCCCATGAAATATCTGCTTCAGTGAAAGCCATTAAAGCCATTTGTCAACCTACTGATTATAAACAAGAATGTGTTGCTAGTCTCAAGGCTGCTGGCAACAACTCTTCAGACCCAAAGGAATTGGTTCAAGCTGGCTTCAAGGCTGCCATGAAGTTGATCCAAGCTGCTGCTAATAAATCTGTCACCTTGAAAGAGCTTGAGAAAGACCCTAGAACCTCCAAGGCCCTTGCTGGTTGTAAAGAGCTCATGGATTTTGCTGTTGACGAGCTTAAATACTCGATGAACAAGCTCGGCGAGTTTGATATTAGTAAACTAGATGAGATGTTGATCGATATTAAGATCTGGCTCAGTGCTACCATTACTTATCAGGAAACTTGCTTGGATGGGTTCGAGAACACAACCGGAAATGCGGCAGAGAAGATGAAGAAGGCATTGAAGACATCAATGCGGTTGAGCAGCAATGGGTTGGCCATGGTGTCGCAAATTTCGTCCATGTTGACAGAGTTGCAGATTCCAGGGATCAGCCGAAGGCGACTTCTCGAGATTCCGGTTCTTGGGCACGACGATTACCCAGACTGGGCAAACCCCGGGATGCGACGACTCCTAGCTGCCGGGACGAAAGTGAAGCCAAACGTTGTGGTGGCCAAGGATGGAAGTGGTCAGTTCAGGACCATTCAAGAGGCTCTTGACAAAGTTCCAAAGAGGAAGAACAATGCAACCTTTGTGATTCATATCAAGGCAGGAGTGTACAAGGAATATCTCATCATCAAAAAATCTCTCACCCATTTGATGCTCATTGGTGATGGCCCCAAAAAGACCATTATCACTGGAAGTAAAAACTTCATTGATGGCACACCCACCTTCAAAACTGCAACGGTTGCTGTGACAGCAGAACACTTCATGGCAAGAGATATCGGGTTCGAAAACACAGCAGGGCCACATAAGCACCAAGCAGTTGCACTGCGGGTCCAAGCCGACAAAGCCGTATTCTACAACTGCGAAATGCATGGCTACCAAGACACTCTCTATGTCCACACCATGCGTCAGTTCTACCGCGATTGCACCATCTCAGGCACCATCGACTTCATCTTCGGTGATGCAGCTGCCATCTTCCAAAGTTGCACCTTCCTAGTCCGCAAGCCCCTTCCAAACCAACAATGCATCGTAACGGCACACGGACGCAAAGAACGCCGCCAACCATCCGCCCTCATCATCCAAAACTGTTCGTTCAAGGCCGACACCGACCTTGCCCCAGTACAAAAACAGTTCCGATCCTTCCTTGGGCGACCATGGAAGGAATATTCGAGAACAATCATCATGGAATCATACATTGGTGATTTGATTCAACCAGAAGGGTGGTTGCCATGGGCTGGAGATTGGGGTTTGAAGACATGTTTTTACACCGAGTTCAACAATTATGGGCCAGGATCTGATAAGTCAAAGAGGGTGAAATGGAGAGGGATTAAGACCATTACGCCACAACATGCTTTGGATTTTACTGCCGGAAGGTTTGTTATGGGGGATAGATGGATTAAGCCCACCGGAGTTCCATATGTCTCCGGCATGACCAGGACCGGCGGCGCGGCTGCAACAGGCGGAGCTGCTCATTGA 1761 48.1 MDYRDDDSQNKKRYAIIGVSSMLLVAMVVAVTVGVNLNQDETSEPATGNKAHEISASVKAIKAICQPTDYKQECVASLKAAGNNSSDPKELVQAGFKAAMKLIQAAANKSVTLKELEKDPRTSKALAGCKELMDFAVDELKYSMNKLGEFDISKLDEMLIDIKIWLSATITYQETCLDGFENTTGNAAEKMKKALKTSMRLSSNGLAMVSQISSMLTELQIPGISRRRLLEIPVLGHDDYPDWANPGMRRLLAAGTKVKPNVVVAKDGSGQFRTIQEALDKVPKRKNNATFVIHIKAGVYKEYLIIKKSLTHLMLIGDGPKKTIITGSKNFIDGTPTFKTATVAVTAEHFMARDIGFENTAGPHKHQAVALRVQADKAVFYNCEMHGYQDTLYVHTMRQFYRDCTISGTIDFIFGDAAAIFQSCTFLVRKPLPNQQCIVTAHGRKERRQPSALIIQNCSFKADTDLAPVQKQFRSFLGRPWKEYSRTIIMESYIGDLIQPEGWLPWAGDWGLKTCFYTEFNNYGPGSDKSKRVKWRGIKTITPQHALDFTAGRFVMGDRWIKPTGVPYVSGMTRTGGAAATGGAAH 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36200064 36202002 - CePI673135_03g017970.1 Cec03g1797 199421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1797 586 SMART PMEI_2 56 208 IPR006501 GO:0004857(InterPro)
Cec03g1797 586 Pfam Plant invertase/pectin methylesterase inhibitor 59 208 IPR006501 GO:0004857(InterPro)
Cec03g1797 586 FunFam Pectinesterase 255 572 - -
Cec03g1797 586 SUPERFAMILY Pectin lyase-like 256 571 IPR011050 -
Cec03g1797 586 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Cec03g1797 586 CDD PMEI-like_3 63 214 - -
Cec03g1797 586 ProSitePatterns Pectinesterase signature 1. 287 306 IPR018040 -
Cec03g1797 586 FunFam Pectinesterase 57 213 - -
Cec03g1797 586 Pfam Pectinesterase 261 558 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec03g1797 586 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 213 IPR035513 -
Cec03g1797 586 Gene3D - 255 572 IPR012334 -
Cec03g1797 586 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 213 IPR035513 -
Cec03g1797 586 NCBIfam pectinesterase inhibitor domain 54 212 IPR006501 GO:0004857(InterPro)
Cec03g1797 586 PANTHER PECTINESTERASE 13 563 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1797 Cec-Chr3:36200064 Cec06g0498 Cec-Chr6:5588404 5.10E-194 dispersed
Cec03g1797 Cec-Chr3:36200064 Cec03g1798 Cec-Chr3:36204177 9.90E-105 tandem
Cec03g1797 Cec-Chr3:36200064 Cec05g0742 Cec-Chr5:6111351 4.00E-199 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1797 K01051 - csv:101207393 1071.61