Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1817 ATGTACCACCTGAATTTGGGCTGTGCTCTTGGAAATGCCGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTTATCAAACTTGATTGCCAGCGTCTTCCTGGGAACCCTTCCACTGCATTTTCTGTCTTTGCGATTTTTGATGGACATAATGGCATTTCAGCTGCCATTTTTGCAAAGGAACATTTATTGGGTAATGTCCTAAGTGCAATTCCTCAAGGGGCTAATCGAGAAAAATGGCTTCAGGCCCTTCCCCGAGCACTAGTTGCTGGTTTTGTTAAAACTGACATAGAGTTTCAGCAGAAAGGGGAAACTTCTGGGACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACCGTTGCATCTGTGGGAGATTCACGGTGCATACTAGACACCCAAGGAGGTGTAGTTTCTCTATTGACAGTTGATCATAGGTTGGAGGAAAATGAAGAAGAGAGGGAACGTGTAACTGCAAGTGGTGGTGAGGTTGGGAGGCTCAATGTTTTTGGCGGGAATGAGGTTGGTCCTCTCCGCTGCTGGCCTGGTGGCTTATGTCTTTCTAGGTCCATTGGGGATACAGATGTAGGAGAATATATTGTCCCAATACCGCATGTTAAGCAAGTGAAGCTTTCTAATGCTGGTGGAAGGCTAATTATTGCTTCTGATGGTATTTGGGATGCATTATCATCTGAAATGGCTGCAAAGTCGTGTCGAGGTTTACCTGCAGAGCTTGCTGCCAAGCTGGTTGTGAAGGAGGCTTTGCGGTCAAGGGGGTTGAAGGATGATACAACTTGCTTAGTTGTTGATATTATCCCATCCGAGCAACCTATACTATTACCATCAACTCCAAGGAAGAAGCAAAATGTGCTTACCTCATTCTTTGGAAAGAAATATCAAAACTCTTTGGGTAAATCTGCAAACAAACTTTCAGCTGTTGGTGTTGTGGAGGAATTGTTCGAAGAAGGTTCTGCTATGCTTGCTGAAAGGCTAGGCAAAGATTTTCCTTCTGATCCAAACTCAGGGATCTTCAAATGTGCAGTCTGTCAAGTGGATCAACCCCCAAACGAAAATTTGTCGATGAACTCGGGGCCTTTCTTTTCACCGTCGTCAAAGCCATGGGAAGGTCCATTCCTCTGTGCAACTTGTCGAAAAAAGAAAGACGCCATGGAAGGAAAAAGGCCAATAAAACCTACAATAACCGTTTAG 1209 44.42 MYHLNLGCALGNAALAKKGEDYFLIKLDCQRLPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGANREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILLPSTPRKKQNVLTSFFGKKYQNSLGKSANKLSAVGVVEELFEEGSAMLAERLGKDFPSDPNSGIFKCAVCQVDQPPNENLSMNSGPFFSPSSKPWEGPFLCATCRKKKDAMEGKRPIKPTITV 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36411574 36414919 + CePI673135_03g018170.1 Cec03g1817 199441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1817 402 SMART PP2C_SIG_2 25 271 IPR001932 -
Cec03g1817 402 PANTHER PROTEIN PHOSPHATASE 18 270 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cec03g1817 402 SMART PP2C_4 4 269 IPR001932 -
Cec03g1817 402 ProSiteProfiles PPM-type phosphatase domain profile. 1 271 IPR001932 -
Cec03g1817 402 Pfam Protein phosphatase 2C 35 254 IPR001932 -
Cec03g1817 402 SUPERFAMILY PP2C-like 17 271 IPR036457 -
Cec03g1817 402 Gene3D - 13 276 IPR036457 -
Cec03g1817 402 CDD PP2Cc 17 271 IPR001932 -
Cec03g1817 402 FunFam probable protein phosphatase 2C 5 9 276 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1817 Cec-Chr3:36411574 Cec05g2476 Cec-Chr5:35844511 6.40E-164 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1817 - - - 0.0