Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1819 ATGAAGCACTTGTTCTTGAAGTTCAATGAACTAACAAAGTCACTAAAAAGATGGAGAAACTCTGAAAATGCTTCTGATGTATGTGGGAGAGAAGCTGCAGAAGCAATGGCAAAGTCTGCAAAGAAGAAGGATCTGATCATCCATGGTTCCGGGAGTATGAATATCAATGGTTCGAGCAACTTTGTCTCAAGTTTTTCGAAGAGGGGTGAGAAAGGAATCAACCAGGACTGCTGCATTGTGTGGGAGGAATTTGGATGTCAAAAGGATATGATATTTTGTGGGGTTTTTGATGGTCATGGACCATGGGGTCATTTTGTTGCAAAGAAGGTTAGAGAGTCAATGCCAACTGCTTTGCTTTGCAATTGGCAAGAAGCACTTGTTCAAACTTCTCTTCACCCACATTTGGAACTCAACTCAGCTAAAACACATCTTCATTTCAATTTGTGGGAGCATTCTTATATAGAAGCTTGTGCTGTGGTGGATCAAGAACTCGAGCGACACCGTAAAATCGACACGTTTCATAGTGGAACAACGGCCCTTTCCATCGTTCGACAAGGTGATACAATTGTCATAGCAAACCTTGGTGACTCCCGGGCCGTTTTGGCTACAACTTCTAATGATGGAAACTTGACGCCGTCACCAATTCAGCTCACTGTCGATTTCAAACCGAATCTACCTCAGGAAGCTGAAAGGATAACACAATGCAATGGGAGGATTTTCTGCTTGCAAGATGAACCCGGGACTCCCCGTCTTTGGTTGCCGAATGGGGAAATGCCGGGGCTATCAATGTCGAGATCGTTTGGCGATTTTTGCGTTAAGCATTTTGGACTTATTTCCGTGCCTGATGTAACACAAAGAAGTTTAACCAACAAAGACTTATTTGTTGTACTTGCAACTGATGGGATATGGGACGTCGTCACGAATCAAGAAGCTGTGCAGATCGTACATTCGACTGTTGATAGACAAAAATCTGCTCGACGACTGGTTGATTATGCTACTCGTGCATGGAAGCGGAAGAGGCCGAAAATTGCAACGGACGACATGTCGGTTGTCGTTCTCTACCTACATTCTTCACCTTTGCATCAACAACCTTTTTCCGCTCGATCCCTGCCTTCCGGCATAAGCACCGCCGCGCCCTTCCTCTTCCTTTCTTCGGCTCCACCGCACCCACACAACAGATTCCCCTCATATTCTATACCCTCTGAACAACGTCTCAGTGCTCGACCTCCGCATAACATTCCCAAACCTTTCTCTGACTTCACCTTTCACAATTTGGCCTTACAAAACTTCCCCGAATCACTCACCTTCATACCAAATGTTTTCCGTTCCACTCTCAGCGTAATGACAGTCACTGGTTTCTCAGAGAATGCTTTGAAACGAGCTGAAGAGCTGATAAATGTTGGCCAGAAGCAAGATGCCTTGCAAGCCCTTCATAATCTTATCACTTCGAAGAAATATCGAGCATGGCAGAAACCTCTTGAGAGGATTATGTTTAAGTATGTTGACCTCTGTGTGGACATGAGGAAAGGAAGGTTTGCTAAGGATGGTTTAATTCAATACCGTATTGTTTGCCAGCAAGTTAATGTTACTTCTTTAGAGGAAGTAATCAAGCACTTTATGCATCTCTCCACTGAGAAGGCAGAGCAGGCTCGTAGTCAAGCTCAAGCTTTAGAAGAAGCTCTGGACGTTGATGATTTGGAAGCTGATAAAAGGCCAGAAGATCTGATGCTTAGTTATGTCAGTGGTGAGAAGGGAAAGGATAGATCTGATCGAGAACTTGTTACCCCTTGGTTTAAATTTCTGTGGGAGACATATCGAACGGTTCTTGAGATACTAAGGAATAACTCAAAGTTGGAGGCACTTTATGCGATGACAGCTCATCGTGCCTTCCAGTTCTGTAAGGTGTATAAAAGAACAACTGAATTTCGCAGATTATGTGAAATTATCCGAAATCATCTTGCTAATCTCAACAAGTACAGAGACCAAAGAGATCGGCCCGACCTTTCTGCTCCAGAGAGCTTGCAATTGTACCTTGACACAAGATTTGAACAGCTGAAGGTTGCCACAGAACTTGAGCTCTGGCAGGAAGCTTTTCGTTCTGTGGAAGATATTCATGGTTTGATGTGCATGGTGAAGAAAACACCTAAACCATCCTTGATGGTGGTGTATTATGTCAAATTAACAGAGATCTTCTGGATATCGGATTGGAATCTTTACCATGCCTATGCATGGCTTAAACTTTTCTCCCTTCAGAAGAGTTTCAACAAAAATCTAAGCCAGAAGGATTTACAGCTGATAGCTTCATCTGTTGTTTTAGCAGCTCTTGCAGTGTCCCCCTATGACTCCAAGCATGGTGCTTCTCATTTAGAACTTGAACATGAGAAAGAGCGAAATTTGAGGATGGCGAATCTTATAGGGTTCAATTTAGACTCCAAACTTGAAAGTAGAGATGTGCTTTCAAGGGCAAATCTTCTTTCTGAACTGGTGTCTAAAGGAGTCCTGAGCTGCGCAACTCAGGATGTTAAAGATCTCTATCATCTTTTGGAGCATGAATTCTTCCCTCTTGATCTTGCAACAAAATTGCAACCCTTACTAAACAAAATATCAAAGCTTGGAGGTAAGCTTTCATCAGCTTCATCTGTCCCCGAAGTGCAATTGTCCCAATATGTTCCGGCTCTTGAAAAACTTGCCACCCTGAGGCTGCTTCAGCAGGTCTCCAAGGTGTATCAGTCTATGAAAATTGAGAGTCTATCACAGATGATCCCATTTTTTGATTTTTCTGCTGTGGAGAAAATATCAGTTGATGCAGTTAAACAAAATTTTATTGCCATGAAAGTTAATCATTCAAGGAACGTTGTGCTATTTGGCAATTTGGGTATTGAATCCGATGGGCTTCGAGACCACCTGACTGTTCTTGCTGAATCCTTAAACAAAGCAAGAGCTATGATCTATCCTCCAGTTGGGAAAGCATCAAAAACAGGTGACATATTGCCTGATTTGGCAGATATTGTTGATAAAGAGCACAAGAGGCTGCTTGCTCGGAAATTAATAATTGAGAAAAGGAAGGAGGAGCAAGAACGTCAACTTTCGGAAATGGAACGTGAGGAGGAATCAAAAAGGTTAAAATTACTGAAGATAAGCGAAGAGGCTGAGCAGAAGCGGCTTGCAGCAGAATATGAACAAAGGAAAAACCAACGGCTTCGTAGAGAAATAGAAGAACAAGAACTTGAAGAAGCACAGGCTTTACTTCAGGAAGCTGAAAAGCGTGTTGGTAAAAGGAAGGGAAGCAGGAAGCCAGTTCTTGACTCTGAAAAGTTGACGAAACAAACTTTAATGCAATTGGCCCTTACTGAACAATTAAGGGAGAGGCAGGAAATGGAGAAGAAATTACAGAAGCTAGCCAAAACTATGGATTATCTAGAAAGAGCAAAAAGAGAAGAGGCTGCAACGTTAATTGAAGCTGCATTTCAGCAACGTTTGCATGAAGAGAGAATGATTCACGAACGTGATCAGCAGCTCGAGGTTGAGCTAAGCAAGCAGCGCCACGAAGGTGACCTCAAGGAGAAGAATCGATTGGCTAGAATGTTGGAGAGTAAGAAAATTTTCCAAGAAAGAGTCGTGAATCTTCGCCAAGAGGAGTTCAGTAGACGTAGAGCAGAGAGAGAAGAACAGATCAGGCAAGTAATTCAGGCTCGGAAAGCAGAAAGGGAGGCTAAGAGGAAGACAATCTTTTATGTAAGGCGTGAAGAGGAGAGGATTAGAATATTACGTGAAGAGGAGGAAGCACGCAAGCGTGAAGAGGCCGAGAGGAAAAAGAGAGAAGAAGCTGAACGCAAGGCTAAATTGGATGAAATTGCTGAGAAGCAGAGACAAAGGGAGCGAGAATTGGAAGAAAAGGAAAGACTGCGGAAAGAAATGCTCTTTGGTGGTGGCAGATCAATTGATCCGCCTGCTAGACCTGATGTTGCTACCGGTTCTCAGCCTCTGGAGTCTGGAACCGCTGCTCCTGCTGCAGCAGCGGCCGCCTCCGCCACATCTCCAGCAAAATACGTGCCAAGGTTTCGACGGACAGAAGGCTCTAGCCCTAATGCACCACCACCTGAATCCGATCGATGGGGAAGCAGCAGGCCTAATAATCGACCATCTCAACCGGATAGCTGGCGCAGTGATGACCGTAGACCGGCTCTTGGAAGTTCAAGGTCGTCATGGTCCTCATCCCGAGCTTCTACTCGTTCTAGCACGGACCGTTGA 4251 44.04 MKHLFLKFNELTKSLKRWRNSENASDVCGREAAEAMAKSAKKKDLIIHGSGSMNINGSSNFVSSFSKRGEKGINQDCCIVWEEFGCQKDMIFCGVFDGHGPWGHFVAKKVRESMPTALLCNWQEALVQTSLHPHLELNSAKTHLHFNLWEHSYIEACAVVDQELERHRKIDTFHSGTTALSIVRQGDTIVIANLGDSRAVLATTSNDGNLTPSPIQLTVDFKPNLPQEAERITQCNGRIFCLQDEPGTPRLWLPNGEMPGLSMSRSFGDFCVKHFGLISVPDVTQRSLTNKDLFVVLATDGIWDVVTNQEAVQIVHSTVDRQKSARRLVDYATRAWKRKRPKIATDDMSVVVLYLHSSPLHQQPFSARSLPSGISTAAPFLFLSSAPPHPHNRFPSYSIPSEQRLSARPPHNIPKPFSDFTFHNLALQNFPESLTFIPNVFRSTLSVMTVTGFSENALKRAEELINVGQKQDALQALHNLITSKKYRAWQKPLERIMFKYVDLCVDMRKGRFAKDGLIQYRIVCQQVNVTSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKVYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSVEDIHGLMCMVKKTPKPSLMVVYYVKLTEIFWISDWNLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVVLAALAVSPYDSKHGASHLELEHEKERNLRMANLIGFNLDSKLESRDVLSRANLLSELVSKGVLSCATQDVKDLYHLLEHEFFPLDLATKLQPLLNKISKLGGKLSSASSVPEVQLSQYVPALEKLATLRLLQQVSKVYQSMKIESLSQMIPFFDFSAVEKISVDAVKQNFIAMKVNHSRNVVLFGNLGIESDGLRDHLTVLAESLNKARAMIYPPVGKASKTGDILPDLADIVDKEHKRLLARKLIIEKRKEEQERQLSEMEREEESKRLKLLKISEEAEQKRLAAEYEQRKNQRLRREIEEQELEEAQALLQEAEKRVGKRKGSRKPVLDSEKLTKQTLMQLALTEQLRERQEMEKKLQKLAKTMDYLERAKREEAATLIEAAFQQRLHEERMIHERDQQLEVELSKQRHEGDLKEKNRLARMLESKKIFQERVVNLRQEEFSRRRAEREEQIRQVIQARKAEREAKRKTIFYVRREEERIRILREEEEARKREEAERKKREEAERKAKLDEIAEKQRQRERELEEKERLRKEMLFGGGRSIDPPARPDVATGSQPLESGTAAPAAAAAASATSPAKYVPRFRRTEGSSPNAPPPESDRWGSSRPNNRPSQPDSWRSDDRRPALGSSRSSWSSSRASTRSSTDR 1416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36421521 36436715 - CePI673135_03g018190.1 Cec03g1819 199443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1819 1416 MobiDBLite consensus disorder prediction 1259 1308 - -
Cec03g1819 1416 FunFam Eukaryotic translation initiation factor 3 subunit A 664 715 - -
Cec03g1819 1416 MobiDBLite consensus disorder prediction 1259 1416 - -
Cec03g1819 1416 Gene3D - 51 357 IPR036457 -
Cec03g1819 1416 Gene3D UVR domain 664 715 - -
Cec03g1819 1416 FunFam Eukaryotic translation initiation factor 3 subunit A 799 941 - -
Cec03g1819 1416 ProSiteProfiles PPM-type phosphatase domain profile. 61 355 IPR001932 -
Cec03g1819 1416 Pfam Protein phosphatase 2C 86 334 IPR001932 -
Cec03g1819 1416 Coils Coil 1246 1305 - -
Cec03g1819 1416 SMART PP2C_4 53 353 IPR001932 -
Cec03g1819 1416 FunFam Eukaryotic translation initiation factor 3 subunit A 715 789 - -
Cec03g1819 1416 MobiDBLite consensus disorder prediction 1362 1384 - -
Cec03g1819 1416 Coils Coil 540 567 - -
Cec03g1819 1416 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 454 1407 IPR027512 GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER)
Cec03g1819 1416 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 448 1391 IPR027512 GO:0005852(InterPro)
Cec03g1819 1416 Coils Coil 1116 1146 - -
Cec03g1819 1416 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 888 979 IPR000717 -
Cec03g1819 1416 MobiDBLite consensus disorder prediction 1396 1416 - -
Cec03g1819 1416 Pfam eIF3a, PCI domain, TPR-like region 455 854 IPR054711 -
Cec03g1819 1416 Coils Coil 1008 1089 - -
Cec03g1819 1416 Coils Coil 1179 1212 - -
Cec03g1819 1416 CDD PP2Cc 60 355 IPR001932 -
Cec03g1819 1416 SUPERFAMILY PP2C-like 58 356 IPR036457 -
Cec03g1819 1416 Pfam PCI domain 885 955 IPR000717 -
Cec03g1819 1416 Gene3D - 716 790 - -
Cec03g1819 1416 Gene3D - 810 941 - -
Cec03g1819 1416 ProSiteProfiles PCI domain profile. 763 960 IPR000717 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0799 Cec-Chr3:9238300 Cec03g1819 Cec-Chr3:36421521 0.00E+00 dispersed
Cec03g0800 Cec-Chr3:9266593 Cec03g1819 Cec-Chr3:36421521 0.00E+00 dispersed
Cec03g1819 Cec-Chr3:36421521 Cec06g0491 Cec-Chr6:5509002 1.00E-99 dispersed
Cec02g1605 Cec-Chr2:33619241 Cec03g1819 Cec-Chr3:36421521 2.40E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1819 K03254 - csv:101215735 1516.52