Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1831 ATGGTTTGTGAAGAAGAAGCTGTAATCCAAAAGGTTTGTGAATTATATGATGAAATCTCAAGCCTTGAAAGCCTAAAACCTTGTAACCATGTCGACACTCTCTTCACTAAATTGGTGGTCACGTGCATGCCACCCACCTCCCCTCATTTCCATATCAATTCACTTTCAAAACCACTTCAACAAATGAGATCAAATCTCATTAGCCTTTGTGGTCAAGCTGAGTCTCTTTTAGAGTCTCATTTTTCTGATCTCTTAGCCAAATTTGATTCCCCTATTCACCATCTCCATGTCTTCCCTTACTTCTCTAATTACCTTAAACTTAGTCTCCTTGAATTCTCCATCCTTCGTCGCCACTGCCCCATCGTGCCCTCTACCGTCGCCTTCGTCGGCTCTGGCCCTCTTCCTCTTACCTCCATCGTCCTCGCCACTCGCCACCTCACCTCCGCTGTCTTCCACAACTACGATCTCGACCCCCTTGCTAATTCCAAGGCATCGAAGTTGGTGTCGCTCGACCCGGACCTGAAGACGAGGATGGTGTTTCACACGTGCGACATCATGAAAGTGACGGAGGAGCTGAAACAGTACGAGGTTGTGTTTTTGGCAGCTCTTGTAGGAATGGAGAAGGAAGAGAAATTGAAAGTGATTAAGCATTTGTCAGAGTTCATGTCAGAAGGAGCTTATTTGATGGTGAGAAGTGCTCATGGAGGAAGAGCTTTTCTATATCCTGTGGTTGAAGATTGTGATTTGGTAGGGTTTGTGGTTCTCTCTGTGTTTCATCCCACTGATGAGGTTATAAACTCGGTAATAATTGCACGAAAAAAGACGAGTTTCGATAACGATAACGATAACGACAACAGTAACGATAACAACGACAAGAGTTATTGTTTGTCTGTTAATTCAGATAAACAAGAGGAAGATGAGAATGAGAAGGTGATGATTAGTAGCAGTGGTATTGATCATAAGAATAATAACAATGGGGTTGTGCATAATAACAAATGTTCTGAGATTCAAAGCTTCAATAATCATGGAGGTAAGATTGAGGAATTTGCCATGGAAGCAGCAGCTGAGTAA 1071 42.86 MVCEEEAVIQKVCELYDEISSLESLKPCNHVDTLFTKLVVTCMPPTSPHFHINSLSKPLQQMRSNLISLCGQAESLLESHFSDLLAKFDSPIHHLHVFPYFSNYLKLSLLEFSILRRHCPIVPSTVAFVGSGPLPLTSIVLATRHLTSAVFHNYDLDPLANSKASKLVSLDPDLKTRMVFHTCDIMKVTEELKQYEVVFLAALVGMEKEEKLKVIKHLSEFMSEGAYLMVRSAHGGRAFLYPVVEDCDLVGFVVLSVFHPTDEVINSVIIARKKTSFDNDNDNDNSNDNNDKSYCLSVNSDKQEEDENEKVMISSSGIDHKNNNNGVVHNNKCSEIQSFNNHGGKIEEFAMEAAAE 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36597371 36599133 + CePI673135_03g018310.1 Cec03g1831 199455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1831 356 MobiDBLite consensus disorder prediction 276 326 - -
Cec03g1831 356 Pfam Nicotianamine synthase protein 5 275 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cec03g1831 356 PANTHER NICOTIANAMINE SYNTHASE 3 5 299 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cec03g1831 356 Gene3D Vaccinia Virus protein VP39 7 275 IPR029063 -
Cec03g1831 356 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cec03g1831 356 MobiDBLite consensus disorder prediction 298 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1579 Cec-Chr2:33378933 Cec03g1831 Cec-Chr3:36597371 3.30E-82 dispersed
Cec06g1523 Cec-Chr6:28737520 Cec03g1831 Cec-Chr3:36597371 5.20E-75 transposed
Cec02g1578 Cec-Chr2:33364221 Cec03g1831 Cec-Chr3:36597371 1.40E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1831 K05953 - csv:101218907 565.074