Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec03g1846 ATGATAATGGTGGCTAAAGAAGAGCGAAGTCTCTCTCATTGCCATTTGCGCACGAGGTCCGTGGCATCGCAACGCAGCTTCCCAAGTTTTGGTGAAGTCCTATGTCCAAACTACACTAGGGTGCCTTTGGTTAACAGAAGTGGATTTGACCGGCAATACAAAATGGATTACCGGGGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGGCTATGCTCAGGAGCAGGGATCTCTTGCTGATGACTTTATTGATGATTTTCGCTTGCCCATCAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCAAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTATTGAGCCAATAAAATCTGGAATGAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGACGATTTTTTCACTGCAGAAGAAAATATCCAGCGGAAAAAACTTGATGTTGAGGTGGAAGAGACAGAAGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCATAATCATAGGAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATTGCGGATGCCCGTAAGAAGCAGCAGCAGATGCTGGAGCAACAAGAAAGAGCAGCCGAGGCTCCTGTTTCTACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCAAAGAACATTTTTGGTGGAGCCACAAAGAAACCGAAAGTAGCACCTGTAGCTTCAGTTTTCGGGAATGATAGCGATGACGAATAG 1062 42.37 MIMVAKEERSLSHCHLRTRSVASQRSFPSFGEVLCPNYTRVPLVNRSGFDRQYKMDYRGYSSRLETNNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKQQQMLEQQERAAEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDE 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 36769057 36772689 - CePI673135_03g018460.1 Cec03g1846 199470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec03g1846 353 SMART G-patch_5 114 159 IPR000467 GO:0003676(InterPro)
Cec03g1846 353 ProSitePatterns Zinc finger C2H2 type domain signature. 213 235 IPR013087 -
Cec03g1846 353 Pfam G-patch domain 117 157 IPR000467 GO:0003676(InterPro)
Cec03g1846 353 MobiDBLite consensus disorder prediction 244 274 - -
Cec03g1846 353 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 55 353 - -
Cec03g1846 353 MobiDBLite consensus disorder prediction 244 353 - -
Cec03g1846 353 SUPERFAMILY beta-beta-alpha zinc fingers 192 245 IPR036236 -
Cec03g1846 353 Coils Coil 274 294 - -
Cec03g1846 353 MobiDBLite consensus disorder prediction 298 328 - -
Cec03g1846 353 ProSiteProfiles G-patch domain profile. 116 161 IPR000467 GO:0003676(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0816 Cec-Chr2:9744356 Cec03g1846 Cec-Chr3:36769057 1.10E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec03g1846 - - - 0.0