Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0128 ATGCCCCCATTTCTCTTCTTCTTCCTACTCACCTTCTCCTTGTTCGTTTCTTTTACTTCCTCTCTCAACTCCGATGGCCTCTCCCTCCTCGCCCTCAAGGCCGCCATTGAATCCGACCCATCTCACATCCTCGAGTCTTGGTCCGAGTTCGACTCCACCCCATGCCACTGGCCAGGAATCGTCTGCACTCGCGACCGAGTCACTCAGCTCTCTCTCCCCAACAAAGGCCTCACCGGCTACATCCCTTCCGAACTCGGCCTCCTCGATTCCCTCCGCCGCCTCACTCTCGCCTTCAACAATTTCTCTAAACCCATTCCTTCCCATCTCTACAACGCTACAAATCTCGTCGTTCTAGACCTTTCCCACAACTCTCTCTCTGGTTCACTGTCTGATCAAATCGGCGATCTGAAGAAGCTTCGGCATCTCGATTTATCCTCAAATGCCCTCAATGGCTCTCTCCCTAATCGCCTCACTGACCTAACCGAACTCGTCGGGACTCTCAATTTGTCCTACAATCGATTCTCCGGCGAGGTTCCGCCTTCCTTCGGCAACCTCCCGCTGATCGTGAATCTCGACGTCCGTCACAACAATCTCACCGGAAAAATCCCTCAAGTGGGTTCGCTGTTGAATCAAGGCCCAACGGCGTTCTCCGGTAACCCGAGTCTGTGTGGGTTTCCGTTACAGACGCCATGTCCGGAAGCACAGAATCCGAATGCCTTTCCTGAGAATCCGCAGAATCCCAAGTCACTGAACCCGAACTTCCAGGGCTACGGCGGCCGGAGAGAGAGTAGCGGCGGTGGGGTGGCCGGGTCGGCGGCGGTGGCAGTGGTGTCGTCGATATTCACAGTTGTGGGGGCGGTGTCGCTGACGGTGTGGTGGTTCCGGAAGAAGGCGGTAGTGGGGAGGCTGGAAGAGGGCAAAACTGGAAAGGGGAGTCCGGAAGGGGAAAGTTGCGGGGAGTTGGAAGGGCAAGATGGTAAATTCGTGGTGATGGATGAAGGGATGAATTTGGAATTAGAGGATTTGTTGAGGGCATCGGCGTACGTGGTGGGGAAGAGTAGGAGTGGGATAGTGTACAAAGTAGTGGCGGGGAGGGGATCCAGTGCGGGCGCGAGTATTGTAGCTGTAAGGAGACTTAACGATGGTGATGCCACGTTGACGTTTAAGGATTTTGAGAATGAGATCGAGGCCATTGGTAGGGTTCACCATCCCAACATTGTACGGTTGAGAGCTTATTACTATGCAACTGACGAGAAATTGCTGGTTACTGATTTCATCAAGAATGGAAGCTTGCACACCGCCCTACATGGAAGTCCCTCCAGTTGTTTGTCACCTCTGCCATGGTCTGCCAGGTTAAAAATTGCCCAAGGAGCTGCAAGGGGTTTGGCATACATTCATGAATTTGGTGCTCGGAAATACGTACATGGAAACATCAAAGCGACGAAAATCCTTGTGGATGAGGATTTCGAGGCTTACATTTCAGGTTTTGGACTAGGTCGACTTGGCCAAGGAGCTCCTAAGTTGACTGCAACTTCGTCCAAGAAGTTGAGCTCAAATCAGAATATAATGATGGGGCCAAGCATTTCAAGTCCCTCAGTGATGTACTTGGCGCCGGAGGTACGGGAGTTTGGAGGGAAGTACACGCAGAAATGTGACGTGTACTCGTTCGGGATGGTGCTTCTACAACTTTTGAGCGGTAGATTGGAAAATGATGGGAAGGGGTTGGAATGGTTGGTGAGAAAGGCGTTTGAAGAAGAGCGGCCATTGACAGAGGTTATAGACCCTGCGCTTGTGCCTGAGATTTATGCCAAGAAACAAGTGGTTTCCATGTTTCACATTGCACTGAATTGCACAGAGCTTGACCCCGAGCTGCGTCCCAGAATGAGATCGGTGTCGGAGAGTCTGGATCGAATCAAATCTGAGTGA 1926 52.08 MPPFLFFFLLTFSLFVSFTSSLNSDGLSLLALKAAIESDPSHILESWSEFDSTPCHWPGIVCTRDRVTQLSLPNKGLTGYIPSELGLLDSLRRLTLAFNNFSKPIPSHLYNATNLVVLDLSHNSLSGSLSDQIGDLKKLRHLDLSSNALNGSLPNRLTDLTELVGTLNLSYNRFSGEVPPSFGNLPLIVNLDVRHNNLTGKIPQVGSLLNQGPTAFSGNPSLCGFPLQTPCPEAQNPNAFPENPQNPKSLNPNFQGYGGRRESSGGGVAGSAAVAVVSSIFTVVGAVSLTVWWFRKKAVVGRLEEGKTGKGSPEGESCGELEGQDGKFVVMDEGMNLELEDLLRASAYVVGKSRSGIVYKVVAGRGSSAGASIVAVRRLNDGDATLTFKDFENEIEAIGRVHHPNIVRLRAYYYATDEKLLVTDFIKNGSLHTALHGSPSSCLSPLPWSARLKIAQGAARGLAYIHEFGARKYVHGNIKATKILVDEDFEAYISGFGLGRLGQGAPKLTATSSKKLSSNQNIMMGPSISSPSVMYLAPEVREFGGKYTQKCDVYSFGMVLLQLLSGRLENDGKGLEWLVRKAFEEERPLTEVIDPALVPEIYAKKQVVSMFHIALNCTELDPELRPRMRSVSESLDRIKSE 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5096488 5103174 - CePI673135_04g001280.1 Cec04g0128 199610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0128 641 Pfam Leucine rich repeat N-terminal domain 22 63 IPR013210 -
Cec04g0128 641 SUPERFAMILY L domain-like 24 228 - -
Cec04g0128 641 Gene3D Transferase(Phosphotransferase) domain 1 426 641 - -
Cec04g0128 641 PRINTS Leucine-rich repeat signature 136 149 - -
Cec04g0128 641 PRINTS Leucine-rich repeat signature 115 128 - -
Cec04g0128 641 ProSiteProfiles Protein kinase domain profile. 344 638 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0128 641 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 639 IPR046959 -
Cec04g0128 641 MobiDBLite consensus disorder prediction 238 258 - -
Cec04g0128 641 MobiDBLite consensus disorder prediction 238 262 - -
Cec04g0128 641 SUPERFAMILY Protein kinase-like (PK-like) 349 636 IPR011009 -
Cec04g0128 641 Pfam Leucine Rich Repeat 166 185 IPR001611 GO:0005515(InterPro)
Cec04g0128 641 FunFam Leucine-rich repeat receptor-like protein kinase 138 233 - -
Cec04g0128 641 Gene3D Ribonuclease Inhibitor 22 164 IPR032675 -
Cec04g0128 641 Gene3D Ribonuclease Inhibitor 165 233 IPR032675 -
Cec04g0128 641 FunFam Leucine-rich repeat receptor-like kinase 27 130 - -
Cec04g0128 641 Pfam Protein tyrosine and serine/threonine kinase 350 635 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g0128 641 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515(InterPro)
Cec04g0128 641 Gene3D Phosphorylase Kinase; domain 1 326 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0128 Cec-Chr4:5096488 Cec11g1436 Cec-Chr11:28520153 5.00E-94 dispersed
Cec04g0128 Cec-Chr4:5096488 Cec05g2466 Cec-Chr5:35796823 8.10E-76 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71878 PF07714 PK_Tyr_Ser-Thr 9.10E-27 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0128 - - - 0.0