Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0195 ATGTTGAATTATATTGATCGTCGGAATCTGATCGGAGATCGCGATTTGATGCAGCCATTATTAGTGTTGTCAAAGTCTGATAATAAGTACGACGGATCTGAGATGTTTAACAACACATCAAAAGGGGAAAACGATTCTCACGGAGGAGGAATGAATGTAAATGCACAAAATTTCGTGAAAAATCCACCGGATTCTCTAAGAAGAATCGATCAAATCGCGAAAAACGGCGTAAATTCTGGTAATCCGACGTCGACAGTGAATGCTGAGATTCACTCCAGTCAGCCAGGGGGATCGATTGCACCAATTCCGACCAGCACATCAGCGACGAACTTGAAGAACCTAAACAATAACAACAGCAACAACAACAACTCTGGTTTCATGGCGACGAAGGGGGGTGGCAGCAGCGGAAATAATTATCGTTGTGACAGCATGGAGACGCCGGGAGTGGTGATAAAGCCGCACACGGGCGGAGATGTGCGGTGGGATGCCATTAACATGGTGTCGAAAGGAGGGGCTTTGAATCTAAGCCATTTCCAGTTATTGAAGAGGCTTGGTTATGGGGATATTGGAAGCGTTTATTTGGTTGAATTGAGAGGAACTGATACATTTTTCGCCATGAAAGTGATGGATAAAGCTTCATTAGCAAGTAGGAATAAGCTTTTGAGGGCACAAACAGAAAGGGAAATTCTAGGGCTTTTGGATCATCCATTTTTGCCTACTCTCTATTCCTATTTTGAAACTGATAAGTTCTATTGTTTGGTTATGGAGTTTTGTAGTGGTGGTAATCTTCATTCTCTTCGACAAAAGCAACCTAATAAGTATTTTACAGAAGAAGCTGCCAGATTCTATGCATCGGAGGTTCTATTAGCACTGGAATACCTTCATATGTTAGGCATAGTCTATAGAGATTTGAAACCCGAAAATCTCTTAATCCGAGACGAAGGTCACATCATGCTCTCCGATTTCGATCTCTCTCTCCGCTGCTCCGTCAGCCCCACTCTTGTCAAATCCTCCTCCGTCAACGTCAACGGCAGCTCCGCCACCGGCAATACCGGCGCCAATGGCGGAGGCAGCGGTGGTATCCTCGACGACGAGTTCGTCGTCCACGGCTGTATGCAGCCTTCCAACTTCCTCCCTCGCATCCTCCCTTCCAAGAAGAACCGCAAGTCCAAATCCGACTTCGGCCTCTTCGTCGGCGGCTCCCTCCCTGAACTCATGGCCGAGCCTACCAACGTCAGATCTATGTCCTTCGTCGGCACTCACGAGTATCTCGCTCCGGAGATCATCCAAGGCGAAGGCCACGGCAGCGCCGTCGACTGGTGGACCTTCGGAATCTTCCTCTACGAACTTCTCCACGGAACCACGCCTTTCAAAGGATCTGGAAATAGAGCTACTCTGTTCAACGTCGTCGAACAACCACTCAGATTCCCCGATGCGCCGCAAGTCAGTCTAGCCGCTAGAGATCTGATCAGAGGGCTCCTCGTCAAGGAGCCGCAAAAAAGAATCGCATATCGGAGAGGCGCAACTGAGATTAAACAGCATCCTTTCTTCGACGGAGTGAATTGGGCGTTGGTGAGAAGCGCAATGCCGCCGCACGTCCCGGAGCCGGTCGATTTCTCGCAGTTCGCTAGAAAGAAGAACTGCACCGGAGCGGCGGAAGACAAGAAACAGGTGGAAATACCGGCGGCTACGGCGTCGACCCCGGCAACCCCGGCGGCGGCGGAGAATTCTTTGCCTTCTACTGGTAGCGATCCCAATTATGTGGATTTTGAGTACTTCTAG 1782 49.21 MLNYIDRRNLIGDRDLMQPLLVLSKSDNKYDGSEMFNNTSKGENDSHGGGMNVNAQNFVKNPPDSLRRIDQIAKNGVNSGNPTSTVNAEIHSSQPGGSIAPIPTSTSATNLKNLNNNNSNNNNSGFMATKGGGSSGNNYRCDSMETPGVVIKPHTGGDVRWDAINMVSKGGALNLSHFQLLKRLGYGDIGSVYLVELRGTDTFFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVSPTLVKSSSVNVNGSSATGNTGANGGGSGGILDDEFVVHGCMQPSNFLPRILPSKKNRKSKSDFGLFVGGSLPELMAEPTNVRSMSFVGTHEYLAPEIIQGEGHGSAVDWWTFGIFLYELLHGTTPFKGSGNRATLFNVVEQPLRFPDAPQVSLAARDLIRGLLVKEPQKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQFARKKNCTGAAEDKKQVEIPAATASTPATPAAAENSLPSTGSDPNYVDFEYF 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7492451 7494551 - CePI673135_04g001950.1 Cec04g0195 199677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0195 593 MobiDBLite consensus disorder prediction 569 584 - -
Cec04g0195 593 CDD STKc_phototropin_like 176 538 - -
Cec04g0195 593 FunFam Serine/threonine-protein kinase AGC1-7 410 535 - -
Cec04g0195 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec04g0195 593 MobiDBLite consensus disorder prediction 553 586 - -
Cec04g0195 593 Gene3D Transferase(Phosphotransferase) domain 1 392 535 - -
Cec04g0195 593 SUPERFAMILY Protein kinase-like (PK-like) 175 545 IPR011009 -
Cec04g0195 593 Gene3D Transferase(Phosphotransferase) domain 1 262 331 - -
Cec04g0195 593 Gene3D Phosphorylase Kinase; domain 1 176 261 - -
Cec04g0195 593 ProSiteProfiles Protein kinase domain profile. 178 517 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0195 593 Pfam Protein kinase domain 179 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0195 593 Pfam Protein kinase domain 366 517 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0195 593 FunFam Serine/threonine-protein kinase AGC1-5 176 261 - -
Cec04g0195 593 FunFam serine/threonine-protein kinase D6PK-like 262 329 - -
Cec04g0195 593 SMART serkin_6 178 517 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec04g0195 593 PANTHER FLIPPASE KINASE 1-RELATED 118 545 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0195 Cec-Chr4:7492451 Cec10g1395 Cec-Chr10:28259783 1.20E-147 dispersed
Cec04g0195 Cec-Chr4:7492451 Cec04g1828 Cec-Chr4:37009330 9.20E-151 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71884 PF00069 Pkinase 1.00E-21 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0195 - - - 0.0