Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0248 ATGGCAGAGGCGGCGGCAGCCGGTTTCTGGCGGAAGCTATTAACCGGACGGTGGTTGATGCTATTTGCATCACTAACAATCATGGCACTGAACGGATCAGGCTACATGTTAGGGCTCTACTCCCCCCGCATCAAATTCATTTTTGGTTACGATCAGTCGGCTCTTAATTTGATCAGCTTCTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCGTCGTCTACGAGGTGGCGCCACCATGGGTGGTTCTCTCGGTCGGCGCCGTCCTCAACTTCTTCGCCTATTTCATGCTCTGGTTGGCAGTTTCCGGCCGGACCGCCGCACCGGCGCTGTGGCTGATGTGCGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTCGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTGGCCTTCTTAAAGGACCAGGATAG 471 53.5 MAEAAAAGFWRKLLTGRWLMLFASLTIMALNGSGYMLGLYSPRIKFIFGYDQSALNLISFFKDLGGNLGVVSGVVYEVAPPWVVLSVGAVLNFFAYFMLWLAVSGRTAAPALWLMCVYMGVAANSLSFANTAALVTCVRNFPLHRGCLLGLLKGPG 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9540164 9541207 + CePI673135_04g002480.1 Cec04g0248 199730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0248 156 SUPERFAMILY MFS general substrate transporter 7 151 IPR036259 -
Cec04g0248 156 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 154 - GO:0016020(PANTHER)
Cec04g0248 156 Pfam Nodulin-like 17 154 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0248 Cec-Chr4:9540164 Cec04g0337 Cec-Chr4:13173505 9.10E-82 dispersed
Cec04g0248 Cec-Chr4:9540164 Cec08g0813 Cec-Chr8:19977796 3.00E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0248 - - - 0.0