Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0432 ATGGGAACCCCGGAATTCCCTAATCTCGGAAAGCATTGCAACTTTGAGGATTGTAAGCAGATCGATTTCTTGCCCTTTACTTGCGATTGCTGTAACCAGGTCTTCTGTTTGGAGCATCGTAGCTACAATAGGCATAGTTGTCCAAAAGCGGATAAATGGGATGTCACTGTTGTCATTTGTCCTCTGTGTGCCAAAGGAGTTCGTCTAATTCCAGAACAAGATCCAAACATTACTTGGGAGGTACATGTAAACACTGAATGTGACCCATCAAATTACGATAAAGTCACAAAGAAGAAAAAATGCCCTGTACCTCGCTGCAGGGAGTTTTTAACGTTTTCAAACACGATCAAGTGTCGGGACTGCTCGGTAGACCACTGTTTGAAGCATCGGTTTGGACCTGACCATAAATGTCCTGGACCCAAAAAACCTGAACCAGAAGGTTTTCCATTTGTTGGTCTATTAAGTAGAAGTAGAAAGGAAGAGAAAGGGACTAAGAAAGCATTGCCCACCTCATCTTCCTCTAAGTGGACTACAGCCTTCCTTAATGCAGCCTCATCTGTTAAAGCCTCAGCCGAGGCAAGCATGACAAAGTTGTCAAATGAATTCAGTCAAACTTGGATCACATCTGGTAGCAGCAGCAACGGTAGAGGTGGAAATGGACAAGTTGAGCAATGTCCACAATGTAGCTCTAAGTTTTCTTCGGTTTCATCGTTAATAGACCATGTTGAAAAAGTTCATGAAAGAGGTGGAAATCGACCTGGGGCAAAGACGGTTGTGATCGATGCATGTCCAAAGTGTAGTAGAGGCTTTGTCGATCCTGTTGCCCTTGTGGAGCATATTGACAAGGATCATGGTGGCACTTCAAGAGCTTGA 873 43.99 MGTPEFPNLGKHCNFEDCKQIDFLPFTCDCCNQVFCLEHRSYNRHSCPKADKWDVTVVICPLCAKGVRLIPEQDPNITWEVHVNTECDPSNYDKVTKKKKCPVPRCREFLTFSNTIKCRDCSVDHCLKHRFGPDHKCPGPKKPEPEGFPFVGLLSRSRKEEKGTKKALPTSSSSKWTTAFLNAASSVKASAEASMTKLSNEFSQTWITSGSSSNGRGGNGQVEQCPQCSSKFSSVSSLIDHVEKVHERGGNRPGAKTVVIDACPKCSRGFVDPVALVEHIDKDHGGTSRA 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16556816 16558828 - CePI673135_04g004320.1 Cec04g0432 199914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0432 290 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 249 - GO:0005737(PANTHER)
Cec04g0432 290 SUPERFAMILY AN1-like Zinc finger 4 60 IPR035896 -
Cec04g0432 290 ProSitePatterns Zinc finger C2H2 type domain signature. 225 246 IPR013087 -
Cec04g0432 290 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270(InterPro)
Cec04g0432 290 Gene3D - 2 59 IPR035896 -
Cec04g0432 290 ProSiteProfiles Zinc finger C2H2 type domain profile. 223 246 IPR013087 -
Cec04g0432 290 Gene3D - 80 148 IPR035896 -
Cec04g0432 290 Gene3D Classic Zinc Finger 188 289 - -
Cec04g0432 290 SMART c2h2final6 223 246 IPR013087 -
Cec04g0432 290 SMART c2h2final6 261 284 IPR013087 -
Cec04g0432 290 Pfam AN1-like Zinc finger 101 142 IPR000058 GO:0008270(InterPro)
Cec04g0432 290 Pfam AN1-like Zinc finger 13 52 IPR000058 GO:0008270(InterPro)
Cec04g0432 290 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270(InterPro)
Cec04g0432 290 SUPERFAMILY AN1-like Zinc finger 93 144 IPR035896 -
Cec04g0432 290 ProSitePatterns Zinc finger C2H2 type domain signature. 263 284 IPR013087 -
Cec04g0432 290 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270(InterPro)
Cec04g0432 290 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0432 Cec-Chr4:16556816 Cec10g1472 Cec-Chr10:29115087 4.80E-36 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29285 PF01428 zf-AN1 4.40E-07 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0432 - - - 0.0