Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0619 ATGGACTTCTTACAGTCTCTGGATCCTCAAATCCTTCTAGGTTTGGCTGTGGCTGTTTTAGCCCTTGCCGTTGGTGCTTTCTATGTATTATCCTCGTCCAAAAAAAGCAAATCCAGAGGTTGCTTGGATCCAGAGGTTTTCAAGGAGTTTAAACTTGTCAAGCGCCTGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCGAATCCTACGTCAGTTCTAGGTCTTCCCATTGGACAACATATAAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGAGGTTATCAAACCGTACACACCTATTACTTTGGATTCTGATGTTGGATATTTTGAATTGGTCATAAAGATGTATCCTCAAGGAAGGATGTCACACCATTTCCGCCAGATGCGTGTAGGCGATTTTCTTGCTGTAAAGGGGCCCAAGGGGCATTTCAGGTATCAACCCGGCGAGGTCAGAGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACGCCTATGTATCAAGTTGCTCGAGCAATATTAGAAAATCCAAATGACAAGACGAGGGTACATCTCATTTATGCCAATGTCACCTATGAGGACATTCTCTTAAAGGAGGAGTTGGATCTTCTTGCCAAAAGGTACCCGGATAGCTTCAAGCTCTATTATGTCTTAAACCAGCCTCCTGAAGCGTGGGATGGTGGCGTCGGATTCGTATCGAAGGAGATGATTCAAGCCCACTGCCCTGCTCCTGCTTCTGATATTCAGATTCTAAGGTGTGGACCACCACCAATGAACAAGGCCATGGCTGCTCATCTGGAAGATCTTGGATATACACCTGAGATGCTTTTCATGTTCTGA 846 45.98 MDFLQSLDPQILLGLAVAVLALAVGAFYVLSSSKKSKSRGCLDPEVFKEFKLVKRLQLSHNVAKFTFTLPNPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLAVKGPKGHFRYQPGEVRAFGMLAGGSGITPMYQVARAILENPNDKTRVHLIYANVTYEDILLKEELDLLAKRYPDSFKLYYVLNQPPEAWDGGVGFVSKEMIQAHCPAPASDIQILRCGPPPMNKAMAAHLEDLGYTPEMLFMF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24760236 24765728 + CePI673135_04g006190.1 Cec04g0619 200101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0619 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491(InterPro)
Cec04g0619 281 Gene3D - 139 281 IPR039261 -
Cec04g0619 281 FunFam NADH-cytochrome b5 reductase 139 281 - -
Cec04g0619 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Cec04g0619 281 Gene3D Translation factors 40 138 - -
Cec04g0619 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491(InterPro)
Cec04g0619 281 FunFam NADH-cytochrome b5 reductase 40 139 - -
Cec04g0619 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 278 IPR039261 -
Cec04g0619 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Cec04g0619 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Cec04g0619 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Cec04g0619 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Cec04g0619 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Cec04g0619 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Cec04g0619 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 19 281 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Cec04g0619 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Cec04g0619 281 CDD cyt_b5_reduct_like 50 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2546 Cec-Chr2:42480680 Cec04g0619 Cec-Chr4:24760236 1.80E-118 dispersed
Cec03g0927 Cec-Chr3:12317838 Cec04g0619 Cec-Chr4:24760236 9.70E-40 dispersed
Cec04g0619 Cec-Chr4:24760236 Cec10g1687 Cec-Chr10:31384645 1.30E-134 dispersed
Cec04g0619 Cec-Chr4:24760236 Cec11g1604 Cec-Chr11:30327135 1.70E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0619 K00326 - csv:101212569 528.094