Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec04g0647 ATGGACGGAAAGGGAAATGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATTGCTATGATCTCTCTCCAATTTGGCTATGCTGGGATGAACATCATCACCAAGGTAGCTCTCAACCGTGGAATGAGCCATTACGTTCTCGTAACCTATCGACAAGCTTTTGCCACGGTTGCCCTCGCTCCGTTCGCCTTCTTCATTGAAAGGAAAGTGAGACCCAAGATTAGTTTCCCTATGTTGATGCAGATTTTCCTTCTGGGTTTGTTAGGGCCAGTGATTGATCAAAACTTTTATTATGCTGGACTGAAGCTCACTTCTCCTACCTTTTCATGTGCCATGAGCAATATGCTTCCTGCAATGACATTCATCTTGGCTCTTCTTTGTAGGATGGAGAAATTGGAGATGAAGAAAGTGAGATGCCAAGCAAAGGTGGTGGGAACATTGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTCGTCTCACCATAATTATCTTCACTCAACTACTTCTTCCAATTACTACTCTTTTGAAAGCACTTATCAAGATTGGGTAAAGGGTTCCATTCTTCTCCTTTTTGCCAATCTTGCTTGGGCTTTGTTCTTCATCCTTCAGGCAATGACATTGAGGAATTACACAGCCCATCTTTCTCTTACAACCCTTGTGTGCTTCTTTGGGACTTTGCAATCCATGGCTGTCACATTTGTAATGGAAAACAAAGCTTCTGTATGGAACATTGGATGGGACATGAATCTTCTTGCTTCTGTTTATGCTGGAATAGTTTCATCAAGCATAGCTTATTATGTCCAAGGGATGATTATGCAAAAGAGAGGGCCTGTTTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCCATAATGGGCTCCTTCATGCTTGCTGAGAAGATGTATATCGGACGTGTTGTTGGAGGTGTTGTAATGGTTGTGGGGCTGTACTCGGTGCTATGGGGGAAATACAAAGATTACAAAGAAAAGGAAGCAATAATAGAAGAAAGCACCATGGTTGAACCAGTGAAGCTTTTAATAAGTGGAGGCAAATTAGTTGAGAATAAGAAGAAAAAATTAGCAACAGTAGTTGAAGAAGAAGAAGAAGAAACGACATCAACATCATCAAACGACATTGAAATGCAAAGGAACAACACAACATCAAATGTCGACAATAATAATGTTTCAAAATTGCCTTGTCCTCCTCCACTACCCATTATTGTTGTTGTAGCTATGGATGAAGCACCACCAAAAGTTTGA 1299 41.03 MDGKGNGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATVALAPFAFFIERKVRPKISFPMLMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTLVTVGGAILMTLYKGNVISFFSSHHNYLHSTTSSNYYSFESTYQDWVKGSILLLFANLAWALFFILQAMTLRNYTAHLSLTTLVCFFGTLQSMAVTFVMENKASVWNIGWDMNLLASVYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLAEKMYIGRVVGGVVMVVGLYSVLWGKYKDYKEKEAIIEESTMVEPVKLLISGGKLVENKKKKLATVVEEEEEETTSTSSNDIEMQRNNTTSNVDNNNVSKLPCPPPLPIIVVVAMDEAPPKV 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25239175 25242966 - CePI673135_04g006470.1 Cec04g0647 200129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec04g0647 432 PANTHER WAT1-RELATED PROTEIN 19 367 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec04g0647 432 MobiDBLite consensus disorder prediction 380 409 - -
Cec04g0647 432 MobiDBLite consensus disorder prediction 388 409 - -
Cec04g0647 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Cec04g0647 432 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
Cec04g0647 432 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1558 Cec-Chr2:33181021 Cec04g0647 Cec-Chr4:25239175 2.00E-71 dispersed
Cec04g0647 Cec-Chr4:25239175 Cec10g1660 Cec-Chr10:31079733 2.70E-123 dispersed
Cec04g0647 Cec-Chr4:25239175 Cec11g1619 Cec-Chr11:30471817 3.90E-98 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec04g0647 - - - 0.0